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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   AP2-1   dehydration-responsive element-binding protein 3-like 
 gma-u.5   100801129   ethylene-responsive transcription factor ERF039-like 
 gma-u.5   100801780   ethylene-responsive transcription factor ERF036 
 mtr-u.5   11420693   ethylene-responsive transcription factor ERF036 
 mtr-u.5   11413436   ethylene-responsive transcription factor ERF039 
 mtr-u.5   25490133   dehydration-responsive element-binding protein 3 
 ath-u.5   TINY2   Integrase-type DNA-binding superfamily protein 
 ath-u.5   ERF38   ERF family protein 38 
 vvi-u.5   100252531   dehydration-responsive element-binding protein 3 
 vvi-u.5   100249652   ethylene-responsive transcription factor ERF038 
 sly-u.5   ERF-H4   ethylene response factor H.4 
 sly-u.5   ERF-H5   ethylene-responsive transcription factor 4 
 osa-u.5   4330203   ethylene-responsive transcription factor ERF039 
 osa-u.5   107280052   ethylene-responsive transcription factor ERF039 
 zma-u.5   100283619   uncharacterized LOC100283619 
 zma-u.5   109943013   ethylene-responsive transcription factor ERF039 

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Top 50 coexpressed genes to AP2-1 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AP2-1 (gma-u.5 coexpression data)

CoexMap"100784419"


gmaLOC100784419 | Entrez gene ID : 100784419      
Species gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi ppo sot tae bna ghi
Paralog 3 3 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2313 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003542090.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_003542090.1)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for XP_003542090.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
AP2-1

.
gma-u.5
for
100801129

.
gma-u.5
for
100801780

.
mtr-u.5
for
11420693

.
mtr-u.5
for
11413436

.
mtr-u.5
for
25490133

.
ath-u.5
for
TINY2

.
ath-u.5
for
ERF38

.
vvi-u.5
for
100252531

.
vvi-u.5
for
100249652

.
sly-u.5
for
ERF-H4

.
sly-u.5
for
ERF-H5

.
osa-u.5
for
4330203

.
osa-u.5
for
107280052

.
zma-u.5
for
100283619

.
zma-u.5
for
109943013

.


Ortholog ID: 201
Species ath ath gma gma sly osa bra vvi vvi ppo ppo mtr mtr tae hvu hvu ghi ghi bna sbi sot cit bdi nta
Symbol TINY2 AT3G60490 LOC100812293 LOC100784134 ERF-H8 LOC107280052 LOC103869194 LOC100268038 LOC100249652 LOC18094599 LOC7462924 LOC11420693 LOC11442235 LOC123041822 LOC123430693 LOC123402106 LOC107929345 LOC107923204 LOC106348553 LOC8085554 LOC102589769 LOC102611994 LOC100826141 LOC107803926
Function* Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor TINY ethylene response factor H.8 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor TINY ethylene-responsive transcription factor ERF038 ethylene-responsive transcription factor ERF039 dehydration-responsive element-binding protein 3 ethylene-responsive transcription factor ERF036 ethylene-responsive transcription factor ERF034 ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039-like ethylene-responsive transcription factor ERF038-like ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF038 ethylene-responsive transcription factor TINY-like ethylene-responsive transcription factor TINY ethylene-responsive transcription factor ERF034-like ethylene-responsive transcription factor ERF039 ethylene-responsive transcription factor ERF039 dehydration-responsive element-binding protein 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
vvi00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04145 Phagosome 3
hvu04517 IgSF CAM signaling 3
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 5
hvu00062 Fatty acid elongation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 2
bna00562 Inositol phosphate metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00061 Fatty acid biosynthesis 2
cit01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
nta00670 One carbon pool by folate 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831031 825220 100812293 100784134 101254925 107280052 103869194 100268038 100249652 18094599 7462924 11420693 11442235 123041822 123430693 123402106 107929345 107923204 106348553 8085554 102589769 102611994 100826141 107803926
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