Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100526922   uncharacterized LOC100526922 
 mtr-u.5   25500995   histone deacetylase complex subunit SAP18 
 ppo-u.5   7465827   histone deacetylase complex subunit SAP18 
 ppo-u.5   7461733   histone deacetylase complex subunit SAP18 
 ath-u.5   SAP18   SIN3 associated polypeptide P18 
 vvi-u.5   100250532   histone deacetylase complex subunit-like 
 sly-u.5   101260232   histone deacetylase complex subunit SAP18 
 osa-u.5   4328127   histone deacetylase complex subunit SAP18 
 zma-u.5   100381502   histone deacetylase complex subunit SAP18 
 zma-u.5   100194333   histone deacetylase complex subunit SAP18 

close


Top 50 coexpressed genes to 100526922 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100526922 (gma-u.5 coexpression data)

CoexMap"100784572"


gmaLOC100784572 | Entrez gene ID : 100784572    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 1 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03013 [list] [network] Nucleocytoplasmic transport (189 genes)
gmx03015 [list] [network] mRNA surveillance pathway (214 genes)
GO BP
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (117 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0008134 [list] [network] transcription factor binding  (45 genes)  IEA  
GO:0003714 [list] [network] transcription corepressor activity  (50 genes)  IEA  
Protein XP_003555455.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 1,  cyto 1,  mito 1,  cyto_nucl 1  (predict for XP_003555455.1)
Subcellular
localization
TargetP
chlo 5,  mito 3  (predict for XP_003555455.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100526922

.
mtr-u.5
for
25500995

.
ppo-u.5
for
7465827

.
ppo-u.5
for
7461733

.
ath-u.5
for
SAP18

.
vvi-u.5
for
100250532

.
sly-u.5
for
101260232

.
osa-u.5
for
4328127

.
zma-u.5
for
100381502

.
zma-u.5
for
100194333

.


Ortholog ID: 7188
Species ath gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol SAP18 LOC100526922 LOC101260232 LOC4328127 LOC100194333 LOC100381502 LOC103866911 LOC100250532 LOC7465827 LOC7461733 LOC25500995 LOC123135857 LOC123143377 LOC123402611 LOC107957286 LOC107910889 LOC106390306 CHLRE_09g404400v5 LOC8055038 LOC107061776 LOC102583352 LOC102613422 LOC100828108 LOC107761194 LOC107826252
Function* SIN3 associated polypeptide P18 uncharacterized LOC100526922 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit-like histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 uncharacterized protein histone deacetylase complex subunit SAP18 auxin response factor 3-like histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18 histone deacetylase complex subunit SAP18-like histone deacetylase complex subunit SAP18-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03020 RNA polymerase 3
ath03420 Nucleotide excision repair 3
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
sly03040 Spliceosome 5
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 9
bra03050 Proteasome 5
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
vvi03040 Spliceosome 3
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03018 RNA degradation 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03050 Proteasome 3
mtr03420 Nucleotide excision repair 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03010 Ribosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae04120 Ubiquitin mediated proteolysis 2
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 6
bna04120 Ubiquitin mediated proteolysis 3
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03010 Ribosome 3
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
cit04136 Autophagy - other 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 4
bdi03040 Spliceosome 2
bdi03013 Nucleocytoplasmic transport 2
bdi03015 mRNA surveillance pathway 2
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03010 Ribosome 5
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819172 100526922 101260232 4328127 100194333 100381502 103866911 100250532 7465827 7461733 25500995 123135857 123143377 123402611 107957286 107910889 106390306 5720765 8055038 107061776 102583352 102613422 100828108 107761194 107826252
The preparation time of this page was 0.2 [sec].