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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100785373   E3 ubiquitin-protein ligase SIS3 
 gma-r.7   100785373   E3 ubiquitin-protein ligase SIS3 
 gma-m.5   100785373   E3 ubiquitin-protein ligase SIS3 
 gma-u.5   100812016   E3 ubiquitin-protein ligase SIS3 
 mtr-u.5   11440189   E3 ubiquitin-protein ligase SIS3 
 ppo-u.5   7457727   E3 ubiquitin-protein ligase SIS3 
 ppo-u.5   7483491   E3 ubiquitin-protein ligase SIS3 
 ath-u.5   SIS3   SUGAR-INSENSITIVE 3 
 vvi-u.5   100260484   E3 ubiquitin-protein ligase SIS3 
 sly-u.5   101258073   E3 ubiquitin-protein ligase SIS3 
 sly-u.5   101247121   E3 ubiquitin-protein ligase SIS3 
 osa-u.5   4337790   E3 ubiquitin-protein ligase SIS3 
 zma-u.5   100284043   uncharacterized LOC100284043 

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Top 50 coexpressed genes to 100785373 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100785373 (gma-u.5 coexpression data)

CoexMap"100785373"


gmaLOC100785373 | Entrez gene ID : 100785373      
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010182 [list] [network] sugar mediated signaling pathway  (4 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (548 genes)  IEA  
Protein XP_003549625.1 [sequence] [blastp]
XP_006600649.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  nucl 1,  cyto 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_003549625.1)
chlo 5,  plas 4,  E.R. 1  (predict for XP_006600649.1)
Subcellular
localization
TargetP
scret 9,  other 3  (predict for XP_003549625.1)
mito 9,  other 8  (predict for XP_006600649.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100785373
gma-r.7
for
100785373
gma-m.5
for
100785373
gma-u.5
for
100812016
mtr-u.5
for
11440189
ppo-u.5
for
7457727
ppo-u.5
for
7483491
ath-u.5
for
SIS3
vvi-u.5
for
100260484
sly-u.5
for
101258073
sly-u.5
for
101247121
osa-u.5
for
4337790
zma-u.5
for
100284043


Ortholog ID: 7609
Species gma gma mtr ppo ppo ath bra bra vvi ghi ghi bna bna cit sly sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100785373 LOC100812016 LOC11440189 LOC7483491 LOC7457727 SIS3 LOC103249163 LOC103874107 LOC100260484 LOC107910161 LOC107887187 LOC106408580 LOC125580717 LOC102615803 LOC101258073 LOC101247121 LOC102594425 LOC107803399 LOC107819062 LOC4337790 LOC100284043 LOC123183883 LOC123102372 LOC123404718 LOC8075450 LOC112270910
Function* E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 SUGAR-INSENSITIVE 3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3-like E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3-like E3 ubiquitin-protein ligase SIS3 uncharacterized LOC100284043 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3 E3 ubiquitin-protein ligase SIS3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00030 Pentose phosphate pathway 2
gma00480 Glutathione metabolism 2
gma01200 Carbon metabolism 2
gma03015 mRNA surveillance pathway 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03022 Basal transcription factors 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi03022 Basal transcription factors 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly04141 Protein processing in endoplasmic reticulum 4
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03022 Basal transcription factors 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100785373 100812016 11440189 7483491 7457727 823954 103249163 103874107 100260484 107910161 107887187 106408580 125580717 102615803 101258073 101247121 102594425 107803399 107819062 4337790 100284043 123183883 123102372 123404718 8075450 112270910
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