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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100785939   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 gma-r.7   100785939   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 gma-m.5   100785939   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 gma-u.5   100800455   tetratricopeptide repeat protein Pyg7-like protein 
 mtr-u.5   25484956   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 ppo-u.5   18104474   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 ppo-u.5   7475810   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 ath-u.5   AT1G22700   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100243534   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 sly-u.5   101263865   tetratricopeptide repeat domain-containing protein PYG7, chloroplastic 
 zma-u.5   100279224   Tetratricopeptide repeat (TPR)-like superfamily protein 

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Top 50 coexpressed genes to 100785939 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100785939 (gma-u.5 coexpression data)

CoexMap"100785939"


gmaLOC100785939 | Entrez gene ID : 100785939      
Species gma mtr ppo ath vvi sly zma cre ghi cit hvu bdi sot bra sbi osa tae nta bna
Paralog 4 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048564 [list] [network] photosystem I assembly  (15 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (205 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006589453.1 [sequence] [blastp]
XP_014618809.1 [sequence] [blastp]
XP_014618810.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 3,  nucl 1,  cyto 1,  mito 1,  plas 1,  vacu 1,  cysk_nucl 1,  mito_plas 1,  cyto_plas 1  (predict for XP_006589453.1)
chlo 9  (predict for XP_014618809.1)
chlo 9  (predict for XP_014618810.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006589453.1)
chlo 9  (predict for XP_014618809.1)
chlo 9  (predict for XP_014618810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100785939

.
gma-r.7
for
100785939

.
gma-m.5
for
100785939

.
gma-u.5
for
100800455

.
mtr-u.5
for
25484956

.
ppo-u.5
for
18104474

.
ppo-u.5
for
7475810

.
ath-u.5
for
AT1G22700

.
vvi-u.5
for
100243534

.
sly-u.5
for
101263865

.
zma-u.5
for
100279224

.


Ortholog ID: 8253
Species ath gma gma sly zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G22700 LOC100785939 LOC100800455 LOC101263865 LOC100279224 LOC103840836 LOC103829317 LOC100243534 LOC7475810 LOC18104474 LOC25484956 LOC123068206 LOC123059791 LOC123442383 LOC107895106 LOC107919990 LOC106401327 BNAC07G13580D CHLRE_12g524300v5 LOC8077267 LOC102590783 LOC102628034 LOC100827086 LOC107788685 LOC107767235
Function* Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat protein Pyg7-like protein tetratricopeptide repeat domain-containing protein PYG7, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic uncharacterized protein uncharacterized LOC8077267 uncharacterized LOC102590783 tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic tetratricopeptide repeat domain-containing protein PYG7, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 5
sbi01240 Biosynthesis of cofactors 4
sbi03010 Ribosome 3
sbi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
nta00620 Pyruvate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838876 100785939 100800455 101263865 100279224 103840836 103829317 100243534 7475810 18104474 25484956 123068206 123059791 123442383 107895106 107919990 106401327 106411091 5722522 8077267 102590783 102628034 100827086 107788685 107767235
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