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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100787481   ubiquitin carboxyl-terminal hydrolase 6 
 gma-r.7   100787481   ubiquitin carboxyl-terminal hydrolase 6 
 gma-u.5   100802120   ubiquitin carboxyl-terminal hydrolase 6 
 mtr-u.5   25500399   ubiquitin carboxyl-terminal hydrolase 6 
 ppo-u.5   18096722   ubiquitin carboxyl-terminal hydrolase 7 
 ppo-u.5   18094826   ubiquitin carboxyl-terminal hydrolase 7 
 ath-u.5   UBP7   ubiquitin carboxyl-terminal hydrolase 
 ath-u.5   UBP6   ubiquitin-specific protease 6 
 vvi-u.5   100254966   ubiquitin carboxyl-terminal hydrolase 6 
 sly-u.5   101251658   ubiquitin carboxyl-terminal hydrolase 6 
 osa-u.5   4326194   ubiquitin carboxyl-terminal hydrolase 6 
 zma-u.5   100282385   ubiquitin carboxyl-terminal hydrolase 6 

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Top 50 coexpressed genes to 100787481 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100787481 (gma-u.5 coexpression data)

CoexMap"100787481"


gmaLOC100787481 | Entrez gene ID : 100787481      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061136 [list] [network] regulation of proteasomal protein catabolic process  (50 genes)  IEA  
GO:0016579 [list] [network] protein deubiquitination  (128 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (267 genes)  IEA  
GO CC
GO MF
GO:0070628 [list] [network] proteasome binding  (27 genes)  IEA  
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (98 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_014634599.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 2,  chlo_mito 2  (predict for XP_014634599.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_014634599.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100787481

.
gma-r.7
for
100787481

.
gma-u.5
for
100802120

.
mtr-u.5
for
25500399

.
ppo-u.5
for
18096722

.
ppo-u.5
for
18094826

.
ath-u.5
for
UBP7

.
ath-u.5
for
UBP6

.
vvi-u.5
for
100254966

.
sly-u.5
for
101251658

.
osa-u.5
for
4326194

.
zma-u.5
for
100282385

.


Ortholog ID: 7227
Species ath ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol UBP6 UBP7 LOC100787481 LOC100802120 LOC101251658 LOC4326194 LOC100282385 LOC103871265 LOC103832829 LOC100254966 LOC18096722 LOC18094826 LOC25500399 LOC123061271 LOC123069817 LOC123443726 LOC107891720 LOC107889097 LOC106346040 LOC106427489 CHLRE_17g726050v5 LOC8075479 LOC102586938 LOC102619927 LOC100824993 LOC107776789 LOC107792007
Function* ubiquitin-specific protease 6 ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 7 ubiquitin carboxyl-terminal hydrolase 7 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 7 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 uncharacterized protein ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6-like ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6 ubiquitin carboxyl-terminal hydrolase 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 7
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma04141 Protein processing in endoplasmic reticulum 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 11
osa00270 Cysteine and methionine metabolism 2
osa00450 Selenocompound metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 7
zma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 10
bra03013 Nucleocytoplasmic transport 4
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae00330 Arginine and proline metabolism 3
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 6
hvu00190 Oxidative phosphorylation 6
hvu04145 Phagosome 6
hvu01230 Biosynthesis of amino acids 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 4
sbi03018 RNA degradation 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 10
cit03018 RNA degradation 2
cit03040 Spliceosome 2
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta04144 Endocytosis 2
nta04517 IgSF CAM signaling 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 4
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841596 821682 100787481 100802120 101251658 4326194 100282385 103871265 103832829 100254966 18096722 18094826 25500399 123061271 123069817 123443726 107891720 107889097 106346040 106427489 5722783 8075479 102586938 102619927 100824993 107776789 107792007
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