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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100788132   protein SCAI homolog 
 gma-r.7   100788132   protein SCAI homolog 
 gma-m.5   100788132   protein SCAI homolog 
 gma-u.5   100801761   protein SCAI 
 gma-u.5   100807440   protein SCAI 
 gma-u.5   100810202   protein SCAI 
 mtr-u.5   25500191   protein SCAI 
 mtr-u.5   25501869   protein SCAI homolog 
 ppo-u.5   7490196   uncharacterized LOC7490196 
 ppo-u.5   7479181   uncharacterized LOC7479181 
 ppo-u.5   7482417   uncharacterized LOC7482417 
 ath-u.5   AT3G03570   signal transducer, putative (DUF3550/UPF0682) 
 ath-u.5   AT4G40050   signal transducer, putative (DUF3550/UPF0682) 
 vvi-u.5   100248830   uncharacterized LOC100248830 
 vvi-u.5   100265400   uncharacterized LOC100265400 
 sly-u.5   101254938   uncharacterized LOC101254938 
 sly-u.5   101262582   uncharacterized LOC101262582 
 osa-u.5   4347932   uncharacterized LOC4347932 
 osa-u.5   4347334   uncharacterized LOC4347334 
 zma-u.5   100278917   protein SCAI homolog 
 zma-u.5   100278709   uncharacterized LOC100278709 

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Top 50 coexpressed genes to 100788132 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100788132 (gma-u.5 coexpression data)

CoexMap"100788132"


gmaLOC100788132 | Entrez gene ID : 100788132      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 3 2 2 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (402 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003714 [list] [network] transcription corepressor activity  (50 genes)  IEA  
Protein XP_003525043.1 [sequence] [blastp]
XP_040871485.1 [sequence] [blastp]
XP_040871486.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_003525043.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2  (predict for XP_040871485.1)
nucl 4,  cyto 2,  nucl_plas 2,  chlo 1,  cysk 1  (predict for XP_040871486.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003525043.1)
other 7  (predict for XP_040871485.1)
other 7  (predict for XP_040871486.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100788132

.
gma-r.7
for
100788132

.
gma-m.5
for
100788132

.
gma-u.5
for
100801761

.
gma-u.5
for
100807440

.
gma-u.5
for
100810202

.
mtr-u.5
for
25500191

.
mtr-u.5
for
25501869

.
ppo-u.5
for
7490196

.
ppo-u.5
for
7479181

.
ppo-u.5
for
7482417

.
ath-u.5
for
AT3G03570

.
ath-u.5
for
AT4G40050

.
vvi-u.5
for
100248830

.
vvi-u.5
for
100265400

.
sly-u.5
for
101254938

.
sly-u.5
for
101262582

.
osa-u.5
for
4347932

.
osa-u.5
for
4347334

.
zma-u.5
for
100278917

.
zma-u.5
for
100278709

.


Ortholog ID: 3010
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT4G40050 AT3G03570 LOC100807440 LOC100788132 LOC101254938 LOC101262582 LOC4347932 LOC100278917 LOC100278709 LOC103859005 LOC108870470 LOC100265400 LOC100248830 LOC7482417 LOC7479181 LOC25500191 LOC25501869 LOC123103752 LOC123111969 LOC123398995 LOC123397295 LOC107934222 LOC107893109 LOC106435092 LOC106438962 CHLRE_14g633100v5 LOC8083264 LOC8063339 LOC102598970 LOC102587300 LOC102615830 LOC102625006 LOC100831896 LOC100833218 LOC107827462 LOC107799399
Function* signal transducer, putative (DUF3550/UPF0682) signal transducer, putative (DUF3550/UPF0682) protein SCAI protein SCAI homolog uncharacterized LOC101254938 uncharacterized LOC101262582 uncharacterized LOC4347932 protein SCAI homolog uncharacterized LOC100278709 protein SCAI protein SCAI homolog uncharacterized LOC100265400 uncharacterized LOC100248830 uncharacterized LOC7482417 uncharacterized LOC7479181 protein SCAI protein SCAI homolog protein SCAI protein SCAI protein SCAI homolog protein SCAI protein SCAI protein SCAI protein SCAI-like protein SCAI-like uncharacterized protein protein SCAI homolog protein SCAI homolog protein SCAI protein SCAI uncharacterized LOC102615830 uncharacterized LOC102625006 protein SCAI protein SCAI homolog uncharacterized LOC107827462 uncharacterized LOC107799399
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 2
ath00020 Citrate cycle (TCA cycle) 2
ath00620 Pyruvate metabolism 2
ath00785 Lipoic acid metabolism 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra04136 Autophagy - other 2
bra04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
mtr03013 Nucleocytoplasmic transport 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 7
tae00770 Pantothenate and CoA biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
tae00770 Pantothenate and CoA biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 2
hvu04075 Plant hormone signal transduction 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04142 Lysosome 2
hvu00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 4
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
sbi01230 Biosynthesis of amino acids 4
sbi04148 Efferocytosis 2
sbi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 3
bdi03250 Viral life cycle - HIV-1 2
bdi03272 Virion - Hepatitis viruses 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 4
nta03013 Nucleocytoplasmic transport 4
nta04120 Ubiquitin mediated proteolysis 2
nta03018 RNA degradation 2
nta03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta04148 Efferocytosis 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830168 821234 100807440 100788132 101254938 101262582 4347932 100278917 100278709 103859005 108870470 100265400 100248830 7482417 7479181 25500191 25501869 123103752 123111969 123398995 123397295 107934222 107893109 106435092 106438962 5718332 8083264 8063339 102598970 102587300 102615830 102625006 100831896 100833218 107827462 107799399
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