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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100788215   atrophin-1 
 gma-r.7   100788215   atrophin-1 
 gma-u.5   AT-1SNBP   HMG I/Y like protein 
 gma-u.5   100802941   atherin 
 mtr-u.5   25496745   translation initiation factor IF-2 
 mtr-u.5   11409630   bromodomain-containing protein 4 
 ppo-u.5   7462486   uncharacterized LOC7462486 
 ppo-u.5   7493496   uncharacterized LOC7493496 
 ath-u.5   HON4   winged-helix DNA-binding transcription factor family protein 
 ath-u.5   HON5   high mobility group A5 
 vvi-u.5   100853898   histone H1 

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Top 50 coexpressed genes to 100788215 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100788215 (gma-u.5 coexpression data)

CoexMap"100788215"


gmaLOC100788215 | Entrez gene ID : 100788215    
Species gma mtr ppo ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 4 2 2 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045910 [list] [network] negative regulation of DNA recombination  (21 genes)  IEA  
GO:0030261 [list] [network] chromosome condensation  (34 genes)  IEA  
GO:0006334 [list] [network] nucleosome assembly  (60 genes)  IEA  
GO CC
GO:0000786 [list] [network] nucleosome  (104 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (353 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0031492 [list] [network] nucleosomal DNA binding  (17 genes)  IEA  
GO:0030527 [list] [network] structural constituent of chromatin  (88 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (950 genes)  IEA  
Protein XP_025979593.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_025979593.2)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_025979593.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100788215

.
gma-r.7
for
100788215

.
gma-u.5
for
AT-1SNBP

.
gma-u.5
for
100802941

.
mtr-u.5
for
25496745

.
mtr-u.5
for
11409630

.
ppo-u.5
for
7462486

.
ppo-u.5
for
7493496

.
ath-u.5
for
HON4

.
ath-u.5
for
HON5

.
vvi-u.5
for
100853898

.


Ortholog ID: 11315
Species ath ath gma gma bra bra vvi ppo ppo mtr mtr ghi ghi bna bna cit
Symbol HON5 HON4 AT-1SNBP LOC100802941 LOC103868672 LOC103838863 LOC100853898 LOC7462486 LOC7493496 LOC25496745 LOC11409630 LOC107946379 LOC107920096 LOC111215894 LOC106389056 LOC102616069
Function* high mobility group A5 winged-helix DNA-binding transcription factor family protein HMG I/Y like protein atherin uncharacterized LOC103868672 histone H1 histone H1 uncharacterized LOC7462486 uncharacterized LOC7493496 translation initiation factor IF-2 bromodomain-containing protein 4 formin-like protein 14 SH3 domain-containing protein C23A1.17 COPII coat assembly protein SEC16-like histone H1 histone H1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo03018 RNA degradation 3
ppo03013 Nucleocytoplasmic transport 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03083 Polycomb repressive complex 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03015 mRNA surveillance pathway 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841283 821328 547676 100802941 103868672 103838863 100853898 7462486 7493496 25496745 11409630 107946379 107920096 111215894 106389056 102616069
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