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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100788501   polynucleotide 3'-phosphatase ZDP 
 gma-r.7   100788501   polynucleotide 3'-phosphatase ZDP 
 gma-u.5   100796730   polynucleotide 3'-phosphatase ZDP 
 mtr-u.5   25497280   polynucleotide 3'-phosphatase ZDP 
 mtr-u.5   25496488   polynucleotide 3'-phosphatase ZDP 
 ppo-u.5   18095483   polynucleotide 3'-phosphatase ZDP 
 ath-u.5   AT3G14890   phosphoesterase 
 vvi-u.5   100243613   polynucleotide 3'-phosphatase ZDP 
 sly-u.5   101244972   polynucleotide 3'-phosphatase ZDP 
 osa-u.5   4327876   polynucleotide 3'-phosphatase ZDP 
 zma-u.5   541878   diphosphonucleotide phosphatase 2 

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Top 50 coexpressed genes to 100788501 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100788501 (gma-u.5 coexpression data)

CoexMap"100788501"


gmaLOC100788501 | Entrez gene ID : 100788501      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03410 [list] [network] Base excision repair (77 genes)
GO BP
GO:0006281 [list] [network] DNA repair  (508 genes)  IEA  
GO CC
GO MF
GO:0046403 [list] [network] polynucleotide 3'-phosphatase activity  (2 genes)  IEA  
GO:0046404 [list] [network] ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity  (2 genes)  IEA  
GO:0003690 [list] [network] double-stranded DNA binding  (950 genes)  IEA  
Protein XP_003525976.1 [sequence] [blastp]
XP_014632169.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 9,  nucl 1  (predict for XP_003525976.1)
cysk 10  (predict for XP_014632169.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003525976.1)
other 8  (predict for XP_014632169.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100788501

.
gma-r.7
for
100788501

.
gma-u.5
for
100796730

.
mtr-u.5
for
25497280

.
mtr-u.5
for
25496488

.
ppo-u.5
for
18095483

.
ath-u.5
for
AT3G14890

.
vvi-u.5
for
100243613

.
sly-u.5
for
101244972

.
osa-u.5
for
4327876

.
zma-u.5
for
541878

.


Ortholog ID: 7209
Species ath gma gma sly osa zma bra bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol AT3G14890 LOC100788501 LOC100796730 LOC101244972 LOC4327876 LOC541878 LOC103869977 LOC103859597 LOC100243613 LOC18095483 LOC25496488 LOC25497280 LOC123079089 LOC123070675 LOC123444350 LOC107943057 LOC107916715 LOC106423563 LOC106401736 CHLRE_09g388726v5 LOC8075544 LOC102582395 LOC102622568 LOC100844676 LOC100841627 LOC107816055 LOC107786424
Function* phosphoesterase polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP diphosphonucleotide phosphatase 2 polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP-like uncharacterized protein polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP polynucleotide 3'-phosphatase ZDP-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
osa03013 Nucleocytoplasmic transport 3
osa03015 mRNA surveillance pathway 3
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03410 Base excision repair 3
zma03083 Polycomb repressive complex 2
zma03430 Mismatch repair 2
zma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03410 Base excision repair 3
ppo03018 RNA degradation 2
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 5
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03040 Spliceosome 3
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 7
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03410 Base excision repair 3
sot03030 DNA replication 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 5
cit03010 Ribosome 3
cit03030 DNA replication 2
cit03008 Ribosome biogenesis in eukaryotes 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00561 Glycerolipid metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820718 100788501 100796730 101244972 4327876 541878 103869977 103859597 100243613 18095483 25496488 25497280 123079089 123070675 123444350 107943057 107916715 106423563 106401736 5720595 8075544 102582395 102622568 100844676 100841627 107816055 107786424
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