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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100788537   MMS19 nucleotide excision repair protein homolog 
 gma-r.7   100788537   MMS19 nucleotide excision repair protein homolog 
 gma-u.5   100782823   MMS19 nucleotide excision repair protein homolog 
 mtr-u.5   11433364   MMS19 nucleotide excision repair protein homolog 
 mtr-u.5   11432373   MMS19 nucleotide excision repair protein homolog 
 ppo-u.5   18096825   MMS19 nucleotide excision repair protein homolog 
 ath-u.5   MET18   ARM repeat superfamily protein 
 vvi-u.5   100260012   MMS19 nucleotide excision repair protein homolog 
 sly-u.5   101259141   MMS19 nucleotide excision repair protein homolog 
 osa-u.5   4342544   MMS19 nucleotide excision repair protein homolog 
 zma-u.5   103634279   putative methyltransferase At1g22800, mitochondrial 
 zma-u.5   100217039   uncharacterized LOC100217039 
 zma-u.5   103633121   ADP-ribosylation factor GTPase-activating protein AGD3 

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Top 50 coexpressed genes to 100788537 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100788537 (gma-u.5 coexpression data)

CoexMap"100788537"


gmaLOC100788537 | Entrez gene ID : 100788537      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 1 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016226 [list] [network] iron-sulfur cluster assembly  (47 genes)  IEA  
GO CC
GO:0097361 [list] [network] cytosolic [4Fe-4S] assembly targeting complex  (3 genes)  IEA  
GO MF
Protein XP_003546956.1 [sequence] [blastp]
XP_006597167.1 [sequence] [blastp]
XP_014623575.1 [sequence] [blastp]
XP_040865708.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_003546956.1)
nucl 4,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_006597167.1)
nucl 4,  cyto 2,  plas 2,  cysk_nucl 2,  cyto_plas 2  (predict for XP_014623575.1)
nucl 4,  cyto 1,  vacu 1,  golg 1,  chlo 1,  plas 1,  E.R. 1,  cyto_pero 1,  E.R._plas 1  (predict for XP_040865708.1)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_003546956.1)
other 6,  chlo 5  (predict for XP_006597167.1)
other 7,  scret 3  (predict for XP_014623575.1)
other 6,  chlo 5  (predict for XP_040865708.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100788537

.
gma-r.7
for
100788537

.
gma-u.5
for
100782823

.
mtr-u.5
for
11433364

.
mtr-u.5
for
11432373

.
ppo-u.5
for
18096825

.
ath-u.5
for
MET18

.
vvi-u.5
for
100260012

.
sly-u.5
for
101259141

.
osa-u.5
for
4342544

.
zma-u.5
for
103634279

.
zma-u.5
for
100217039

.
zma-u.5
for
103633121

.


Ortholog ID: 8644
Species ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol MET18 LOC100788537 LOC100782823 LOC101259141 LOC4342544 LOC103634279 LOC100217039 LOC103854514 LOC100260012 LOC18096825 LOC11433364 LOC11432373 LOC123149347 LOC123155879 LOC123407257 LOC107937284 LOC107937347 LOC106429023 LOC106402247 CHLRE_13g605050v5 LOC8060730 LOC102585560 LOC102610725 LOC100836414 LOC107788467 LOC107826625
Function* ARM repeat superfamily protein MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog putative methyltransferase At1g22800, mitochondrial uncharacterized LOC100217039 MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog uncharacterized protein MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog MMS19 nucleotide excision repair protein homolog
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03010 Ribosome 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma03008 Ribosome biogenesis in eukaryotes 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 2
bra03030 DNA replication 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi00040 Pentose and glucuronate interconversions 2
ghi00052 Galactose metabolism 2
ghi00500 Starch and sucrose metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03020 RNA polymerase 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03020 RNA polymerase 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834864 100788537 100782823 101259141 4342544 103634279 100217039 103854514 100260012 18096825 11433364 11432373 123149347 123155879 123407257 107937284 107937347 106429023 106402247 66056116 8060730 102585560 102610725 100836414 107788467 107826625
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