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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100789771   3-dehydrosphinganine reductase TSC10A 
 gma-r.7   100789771   3-dehydrosphinganine reductase TSC10A 
 gma-u.5   100804733   3-dehydrosphinganine reductase TSC10A 
 mtr-u.5   25486113   3-dehydrosphinganine reductase TSC10A 
 ppo-u.5   18102699   3-dehydrosphinganine reductase TSC10A 
 ath-u.5   TSC10A   NAD(P)-binding Rossmann-fold superfamily protein 
 ath-u.5   TSC10B   NAD(P)-binding Rossmann-fold superfamily protein 
 vvi-u.5   100251050   3-dehydrosphinganine reductase TSC10A 
 sly-u.5   101262727   3-dehydrosphinganine reductase TSC10A 
 osa-u.5   4330439   3-dehydrosphinganine reductase TSC10A 
 zma-u.5   100193352   3-ketodihydrosphingosine reductase 
 zma-u.5   100384036   uncharacterized LOC100384036 

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Top 50 coexpressed genes to 100789771 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100789771 (gma-u.5 coexpression data)

CoexMap"100789771"


gmaLOC100789771 | Entrez gene ID : 100789771      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00600 [list] [network] Sphingolipid metabolism (54 genes)
gmx04382 [list] [network] Cornified envelope formation (56 genes)
GO BP
GO:0006666 [list] [network] 3-keto-sphinganine metabolic process  (2 genes)  IEA  
GO:0030148 [list] [network] sphingolipid biosynthetic process  (44 genes)  IEA  
GO CC
GO:0005789 [list] [network] endoplasmic reticulum membrane  (411 genes)  IEA  
GO MF
GO:0047560 [list] [network] 3-dehydrosphinganine reductase activity  (2 genes)  IEA  
Protein XP_003546136.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  vacu 1,  E.R. 1,  E.R._vacu 1,  nucl 1,  cyto 1,  plas 1,  pero 1,  cyto_nucl 1,  nucl_plas 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_003546136.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_003546136.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100789771

.
gma-r.7
for
100789771

.
gma-u.5
for
100804733

.
mtr-u.5
for
25486113

.
ppo-u.5
for
18102699

.
ath-u.5
for
TSC10A

.
ath-u.5
for
TSC10B

.
vvi-u.5
for
100251050

.
sly-u.5
for
101262727

.
osa-u.5
for
4330439

.
zma-u.5
for
100193352

.
zma-u.5
for
100384036

.


Ortholog ID: 5722
Species ath ath gma gma sly osa zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol TSC10B TSC10A LOC100789771 LOC100804733 LOC101262727 LOC4330439 LOC100384036 LOC100193352 LOC103854449 LOC100251050 LOC18102699 LOC25486113 LOC123128105 LOC123137892 LOC123403340 LOC107957006 LOC121217842 LOC106400578 CHLRE_17g702750v5 LOC8073166 LOC102600214 LOC102603207 LOC102610829 LOC100842960 LOC107801646 LOC107782703
Function* NAD(P)-binding Rossmann-fold superfamily protein NAD(P)-binding Rossmann-fold superfamily protein 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A uncharacterized LOC100384036 3-ketodihydrosphingosine reductase 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A-like 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A uncharacterized protein 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A-like 3-dehydrosphinganine reductase TSC10A-like 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A 3-dehydrosphinganine reductase TSC10A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00600 Sphingolipid metabolism 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 3
ath00600 Sphingolipid metabolism 2
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 5
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00600 Sphingolipid metabolism 4
osa04382 Cornified envelope formation 3
osa01212 Fatty acid metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 5
zma04382 Cornified envelope formation 4
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 7
zma04382 Cornified envelope formation 6
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 4
bra04141 Protein processing in endoplasmic reticulum 4
bra00513 Various types of N-glycan biosynthesis 3
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 7
tae04382 Cornified envelope formation 7
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 7
tae04382 Cornified envelope formation 7
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 3
ghi04382 Cornified envelope formation 3
ghi00440 Phosphonate and phosphinate metabolism 2
ghi00564 Glycerophospholipid metabolism 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00520 Amino sugar and nucleotide sugar metabolism 2
bna01250 Biosynthesis of nucleotide sugars 2
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bna01230 Biosynthesis of amino acids 2
bna00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 3
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 4
nta04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00785 Lipoic acid metabolism 5
nta00600 Sphingolipid metabolism 4
nta04382 Cornified envelope formation 4
nta00010 Glycolysis / Gluconeogenesis 3
nta00020 Citrate cycle (TCA cycle) 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832040 819779 100789771 100804733 101262727 4330439 100384036 100193352 103854449 100251050 18102699 25486113 123128105 123137892 123403340 107957006 121217842 106400578 5717272 8073166 102600214 102603207 102610829 100842960 107801646 107782703
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