ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100791908	mitochondrial carnitine/acylcarnitine carrier-like protein-like
gma-r.7	100791908	mitochondrial carnitine/acylcarnitine carrier-like protein-like
gma-u.5	100787332	mitochondrial carnitine/acylcarnitine carrier-like protein
gma-u.5	100787304	mitochondrial carnitine/acylcarnitine carrier-like protein-like
gma-u.5	100781634	mitochondrial carnitine/acylcarnitine carrier-like protein-like
mtr-u.5	11406269	mitochondrial carnitine/acylcarnitine carrier-like protein
mtr-u.5	25501393	mitochondrial carnitine/acylcarnitine carrier-like protein
ppo-u.5	18094170	mitochondrial carnitine/acylcarnitine carrier-like protein
ppo-u.5	18096968	mitochondrial carnitine/acylcarnitine carrier-like protein
ath-u.5	BOU	Mitochondrial substrate carrier family protein
vvi-u.5	100257503	mitochondrial carnitine/acylcarnitine carrier-like protein
sly-u.5	101267615	mitochondrial carnitine/acylcarnitine carrier-like protein
sly-u.5	101262875	mitochondrial carnitine/acylcarnitine carrier-like protein
osa-u.5	4349476	mitochondrial carnitine/acylcarnitine carrier-like protein
osa-u.5	4349475	mitochondrial carnitine/acylcarnitine carrier-like protein
zma-u.5	118476033	mitochondrial carnitine/acylcarnitine carrier-like protein

Top 50 coexpressed genes to 100791908 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100791908 (gma-u.5 coexpression data)

CoexMap"100791908"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:1990575 [list] [network] mitochondrial L-ornithine transmembrane transport

(10 genes)

IEA

GO CC

GO MF

GO:0000064 [list] [network] L-ornithine transmembrane transporter activity

(10 genes)

IEA

Protein

NP_001240170.1 [sequence] [blastp]
XP_006572862.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, plas 2, E.R._vacu 2, cyto 1, extr 1, mito_plas 1	(predict for NP_001240170.1)
vacu 4, plas 2, E.R._vacu 2, cyto 1, extr 1, mito_plas 1	(predict for XP_006572862.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001240170.1)
other 8	(predict for XP_006572862.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100791908 .	gma-r.7 for 100791908 .	gma-u.5 for 100787332 .	gma-u.5 for 100787304 .	gma-u.5 for 100781634 .	mtr-u.5 for 11406269 .	mtr-u.5 for 25501393 .	ppo-u.5 for 18094170 .	ppo-u.5 for 18096968 .	ath-u.5 for BOU .	vvi-u.5 for 100257503 .	sly-u.5 for 101267615 .	sly-u.5 for 101262875 .	osa-u.5 for 4349476 .	osa-u.5 for 4349475 .	zma-u.5 for 118476033 .

Ortholog

Ortholog ID: 2941

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

BOU

Function^*

Mitochondrial substrate carrier family protein

mitochondrial carnitine/acylcarnitine carrier-like protein-like

mitochondrial carnitine/acylcarnitine carrier-like protein

uncharacterized protein

mitochondrial carnitine/acylcarnitine carrier-like protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	8
ath00630	Glyoxylate and dicarboxylate metabolism	5
ath00260	Glycine, serine and threonine metabolism	4
ath00670	One carbon pool by folate	4
ath00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01200	Carbon metabolism	10
gma00630	Glyoxylate and dicarboxylate metabolism	6
gma00260	Glycine, serine and threonine metabolism	4
gma00670	One carbon pool by folate	4
gma00785	Lipoic acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00260	Glycine, serine and threonine metabolism	2
gma00630	Glyoxylate and dicarboxylate metabolism	2
gma00670	One carbon pool by folate	2
gma00785	Lipoic acid metabolism	2
gma01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	5
sly01200	Carbon metabolism	4
sly01240	Biosynthesis of cofactors	3
sly00010	Glycolysis / Gluconeogenesis	3
sly01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00071	Fatty acid degradation	3
sly01212	Fatty acid metabolism	3
sly04016	MAPK signaling pathway - plant	2
sly04075	Plant hormone signal transduction	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	9
osa01200	Carbon metabolism	8
osa00020	Citrate cycle (TCA cycle)	3
osa01210	2-Oxocarboxylic acid metabolism	3
osa00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	6
zma00020	Citrate cycle (TCA cycle)	4
zma01200	Carbon metabolism	4
zma00270	Cysteine and methionine metabolism	3
zma00566	Sulfoquinovose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	3
bra00910	Nitrogen metabolism	2
bra00750	Vitamin B6 metabolism	2
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	3
bra00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	6
vvi00710	Carbon fixation by Calvin cycle	5
vvi00195	Photosynthesis	3
vvi00630	Glyoxylate and dicarboxylate metabolism	3
vvi00053	Ascorbate and aldarate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01230	Biosynthesis of amino acids	9
ppo00670	One carbon pool by folate	7
ppo01200	Carbon metabolism	7
ppo00270	Cysteine and methionine metabolism	6
ppo01240	Biosynthesis of cofactors	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	10
ppo00710	Carbon fixation by Calvin cycle	8
ppo01230	Biosynthesis of amino acids	8
ppo00630	Glyoxylate and dicarboxylate metabolism	5
ppo00030	Pentose phosphate pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	5
mtr00020	Citrate cycle (TCA cycle)	4
mtr01210	2-Oxocarboxylic acid metabolism	4
mtr01230	Biosynthesis of amino acids	3
mtr00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	4
mtr03010	Ribosome	3
mtr00710	Carbon fixation by Calvin cycle	2
mtr01230	Biosynthesis of amino acids	2
mtr00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	5
tae00220	Arginine biosynthesis	3
tae00250	Alanine, aspartate and glutamate metabolism	3
tae00910	Nitrogen metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	3
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00630	Glyoxylate and dicarboxylate metabolism	6
cre01200	Carbon metabolism	6
cre00260	Glycine, serine and threonine metabolism	5
cre00250	Alanine, aspartate and glutamate metabolism	2
cre01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	4
sbi00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
sbi01230	Biosynthesis of amino acids	3
sbi00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00900	Terpenoid backbone biosynthesis	4
sot01200	Carbon metabolism	3
sot00280	Valine, leucine and isoleucine degradation	3
sot00650	Butanoate metabolism	3
sot00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	3
sot00630	Glyoxylate and dicarboxylate metabolism	2
sot00053	Ascorbate and aldarate metabolism	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00053	Ascorbate and aldarate metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	6
bdi00480	Glutathione metabolism	2
bdi00510	N-Glycan biosynthesis	2
bdi00513	Various types of N-glycan biosynthesis	2
bdi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00195	Photosynthesis	3
bdi00260	Glycine, serine and threonine metabolism	2
bdi01200	Carbon metabolism	2
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00630	Glyoxylate and dicarboxylate metabolism	8
nta00260	Glycine, serine and threonine metabolism	6
nta01200	Carbon metabolism	6
nta00670	One carbon pool by folate	4
nta00785	Lipoic acid metabolism	4

Expression

Expression pattern

Entrez Gene ID^*

834724

100781634

100791908

101262875

101267615

4349475

4349476

118476033

103839576

103853744

100257503

18096968

18094170

11406269

25501393

123160088

123435965

123435981

107950122

107946829

106381834

106446151

5717071

5729104

8055150

102580239

102588587

102628303

100834938

106866561

107812362

107790364

The preparation time of this page was 0.1 [sec].


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	sbi	nta	bra	cre	hvu	cit	bdi	sot	tae	bna	ghi
Paralog	5	2	2	1	1	2	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100791908 (gma-u.5 coexpression data)

Top 50 enrichment test to 100791908 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**