ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100793483	phosphatase YqaB-like
gma-r.7	100793483	phosphatase YqaB-like
gma-u.5	100802762	phosphatase YqaB-like
gma-u.5	100805421	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
mtr-u.5	11439431	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ppo-u.5	18094216	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ppo-u.5	18105027	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ath-u.5	AT2G38740	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
vvi-u.5	100252262	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
vvi-u.5	100247838	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sly-u.5	101258396	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sly-u.5	101245863	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
osa-u.5	4349443	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
osa-u.5	112935984	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
zma-u.5	100282116	uncharacterized LOC100282116
zma-u.5	100501636	uncharacterized LOC100501636

Top 50 coexpressed genes to 100793483 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100793483 (gma-u.5 coexpression data)

CoexMap"100793483"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001240977.1 [sequence] [blastp]
XP_040872812.1 [sequence] [blastp]

Subcellular
localization
wolf

E.R._plas 3, E.R. 3, plas 2, cyto_E.R. 1, mito 1, vacu 1	(predict for NP_001240977.1)
plas 3, cyto 2, cyto_E.R. 1, mito 1, vacu 1, golg_plas 1	(predict for XP_040872812.1)

Subcellular
localization
TargetP

other 7	(predict for NP_001240977.1)
other 8	(predict for XP_040872812.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100793483 .	gma-r.7 for 100793483 .	gma-u.5 for 100802762 .	gma-u.5 for 100805421 .	mtr-u.5 for 11439431 .	ppo-u.5 for 18094216 .	ppo-u.5 for 18105027 .	ath-u.5 for AT2G38740 .	vvi-u.5 for 100252262 .	vvi-u.5 for 100247838 .	sly-u.5 for 101258396 .	sly-u.5 for 101245863 .	osa-u.5 for 4349443 .	osa-u.5 for 112935984 .	zma-u.5 for 100282116 .	zma-u.5 for 100501636 .

Ortholog

Ortholog ID: 3091

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

cre

sbi

sot

cit

bdi

nta

Symbol

Function^*

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

phosphatase YqaB-like

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

uncharacterized LOC100282116

uncharacterized LOC100501636

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

uncharacterized protein

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00740	Riboflavin metabolism	2
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00053	Ascorbate and aldarate metabolism	2
gma00071	Fatty acid degradation	2
gma00280	Valine, leucine and isoleucine degradation	2
gma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	5
gma00564	Glycerophospholipid metabolism	3
gma00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	5
sly00020	Citrate cycle (TCA cycle)	3
sly00620	Pyruvate metabolism	3
sly01200	Carbon metabolism	3
sly00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00920	Sulfur metabolism	2
osa01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	9
osa00010	Glycolysis / Gluconeogenesis	8
osa00620	Pyruvate metabolism	6
osa01230	Biosynthesis of amino acids	5
osa00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	4
ppo01200	Carbon metabolism	4
ppo01230	Biosynthesis of amino acids	4
ppo00564	Glycerophospholipid metabolism	2
ppo00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	6
mtr01240	Biosynthesis of cofactors	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	6
tae00061	Fatty acid biosynthesis	3
tae00071	Fatty acid degradation	3
tae01212	Fatty acid metabolism	3
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	6
tae00260	Glycine, serine and threonine metabolism	5
tae01230	Biosynthesis of amino acids	5
tae00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2
sbi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00230	Purine metabolism	2
sbi01200	Carbon metabolism	2
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot00750	Vitamin B6 metabolism	2
sot00053	Ascorbate and aldarate metabolism	2
sot00562	Inositol phosphate metabolism	2
sot04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2
cit04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta01200	Carbon metabolism	3
nta00020	Citrate cycle (TCA cycle)	2
nta00310	Lysine degradation	2
nta00380	Tryptophan metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

818456

100805421

100793483

101258396

4349443

112935984

100282116

100501636

103865684

103857810

100247838

18096924

18094216

11439431

123167532

123088445

123411568

123426748

107886386

107943055

106447684

106410648

5717124

8055620

8066886

102596724

102599074

102618265

100838401

100831053

107781930

107823693

The preparation time of this page was 0.1 [sec].


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	tae	hvu	ghi	bdi	cit	bra	cre	sbi	bna	nta	sot
Paralog	4	1	2	1	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100793483 (gma-u.5 coexpression data)

Top 50 enrichment test to 100793483 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**