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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100793933   protein CHROMATIN REMODELING 4 
 gma-r.7   100793933   protein CHROMATIN REMODELING 4 
 gma-u.5   100815815   protein CHROMATIN REMODELING 4 
 mtr-u.5   11415434   protein CHROMATIN REMODELING 4 
 ppo-u.5   18093999   protein CHROMATIN REMODELING 4 
 ppo-u.5   7479205   protein CHROMATIN REMODELING 4 
 ath-u.5   CHR4   chromatin remodeling 4 
 vvi-u.5   100247555   protein CHROMATIN REMODELING 4 
 sly-u.5   101248171   protein CHROMATIN REMODELING 4 
 osa-u.5   4343299   protein CHROMATIN REMODELING 4 
 zma-u.5   103647692   protein CHROMATIN REMODELING 4 
 zma-u.5   103633189   Protein CHROMATIN REMODELING 4 

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Top 50 coexpressed genes to 100793933 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100793933 (gma-u.5 coexpression data)

CoexMap"100793933"


gmaLOC100793933 | Entrez gene ID : 100793933      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (245 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (372 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (67 genes)  IEA  
GO:0042393 [list] [network] histone binding  (111 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (270 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (756 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003524120.2 [sequence] [blastp]
XP_006580049.1 [sequence] [blastp]
XP_006580050.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 2,  cysk 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_003524120.2)
nucl 5,  chlo 2,  cysk 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_006580049.1)
nucl 5,  chlo 2,  cysk 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_006580050.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_003524120.2)
chlo 4,  other 3  (predict for XP_006580049.1)
chlo 4,  other 3  (predict for XP_006580050.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100793933

.
gma-r.7
for
100793933

.
gma-u.5
for
100815815

.
mtr-u.5
for
11415434

.
ppo-u.5
for
18093999

.
ppo-u.5
for
7479205

.
ath-u.5
for
CHR4

.
vvi-u.5
for
100247555

.
sly-u.5
for
101248171

.
osa-u.5
for
4343299

.
zma-u.5
for
103647692

.
zma-u.5
for
103633189

.


Ortholog ID: 9140
Species ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol CHR4 LOC100793933 LOC100815815 LOC101248171 LOC4343299 LOC103633189 LOC103647692 LOC103839156 LOC100247555 LOC7479205 LOC18093999 LOC11415434 LOC123188484 LOC123052609 LOC123425981 LOC107945231 LOC107935852 LOC125580398 LOC106345862 LOC8080707 LOC102595637 LOC102618865 LOC100822490 LOC107769008 LOC107777459
Function* chromatin remodeling 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 Protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4-like protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4 protein CHROMATIN REMODELING 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00310 Lysine degradation 2
mtr03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna03015 mRNA surveillance pathway 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834510 100793933 100815815 101248171 4343299 103633189 103647692 103839156 100247555 7479205 18093999 11415434 123188484 123052609 123425981 107945231 107935852 125580398 106345862 8080707 102595637 102618865 100822490 107769008 107777459
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