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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100793935   protein pelota-like 
 gma-r.7   100793935   protein pelota-like 
 gma-m.5   100793935   protein pelota-like 
 gma-u.5   100800939   protein PELOTA 1 
 mtr-u.5   25484607   protein PELOTA 1 
 ppo-u.5   7464808   protein PELOTA 1 
 ath-u.5   AT3G58390   Eukaryotic release factor 1 (eRF1) family protein 
 ath-u.5   PEL1   Eukaryotic release factor 1 (eRF1) family protein 
 vvi-u.5   100256390   protein PELOTA 1 
 sly-u.5   PELOTA   protein pelota homolog 
 osa-u.5   9269039   protein PELOTA 1 
 zma-u.5   103645815   protein PELOTA 1 

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Top 50 coexpressed genes to 100793935 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100793935 (gma-u.5 coexpression data)

CoexMap"100793935"


gmaLOC100793935 | Entrez gene ID : 100793935      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03015 [list] [network] mRNA surveillance pathway (214 genes)
GO BP
GO:0070481 [list] [network] nuclear-transcribed mRNA catabolic process, non-stop decay  (3 genes)  IEA  
GO:0070651 [list] [network] nonfunctional rRNA decay  (3 genes)  IEA  
GO:0070966 [list] [network] nuclear-transcribed mRNA catabolic process, no-go decay  (3 genes)  IEA  
GO:0032790 [list] [network] ribosome disassembly  (20 genes)  IEA  
GO:0071025 [list] [network] RNA surveillance  (28 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
Protein NP_001242204.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 2,  mito 1,  plas 1,  pero 1,  cyto_mito 1  (predict for NP_001242204.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001242204.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100793935

.
gma-r.7
for
100793935

.
gma-m.5
for
100793935

.
gma-u.5
for
100800939

.
mtr-u.5
for
25484607

.
ppo-u.5
for
7464808

.
ath-u.5
for
AT3G58390

.
ath-u.5
for
PEL1

.
vvi-u.5
for
100256390

.
sly-u.5
for
PELOTA

.
osa-u.5
for
9269039

.
zma-u.5
for
103645815

.


Ortholog ID: 8513
Species ath ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sot cit cit nta nta
Symbol AT3G58390 PEL1 LOC100793935 LOC100800939 PELOTA LOC9269039 LOC103645815 LOC103861707 LOC100256390 LOC7464808 LOC25484607 LOC123047004 LOC123190678 LOC123428056 LOC107909075 LOC106440967 LOC106407055 CHLRE_09g388615v5 LOC110436527 LOC102593007 LOC102617256 LOC102616755 LOC107827364 LOC107790825
Function* Eukaryotic release factor 1 (eRF1) family protein Eukaryotic release factor 1 (eRF1) family protein protein pelota-like protein PELOTA 1 protein pelota homolog protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 uncharacterized protein protein PELOTA 1 protein PELOTA 1 protein PELOTA 1 protein PELOTA 1-like protein PELOTA 1 protein PELOTA 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01250 Biosynthesis of nucleotide sugars 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
zma03022 Basal transcription factors 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04144 Endocytosis 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo04144 Endocytosis 3
ppo04145 Phagosome 3
ppo04148 Efferocytosis 2
ppo04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03020 RNA polymerase 3
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03420 Nucleotide excision repair 4
tae03015 mRNA surveillance pathway 3
tae03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825008 828876 100793935 100800939 101251671 9269039 103645815 103861707 100256390 7464808 25484607 123047004 123190678 123428056 107909075 106440967 106407055 5720592 110436527 102593007 102617256 102616755 107827364 107790825
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