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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100794165   DNA repair protein RadA 
 gma-r.7   100794165   DNA repair protein RadA 
 gma-m.5   100794165   DNA repair protein RadA 
 gma-u.5   100791181   DNA repair protein RadA 
 mtr-u.5   11427154   DNA repair protein RadA 
 mtr-u.5   11424963   DNA repair protein RadA 
 ppo-u.5   7475108   uncharacterized LOC7475108 
 ath-u.5   AT5G50340   DNA repair protein RadA-like protein 
 bra-r.6   103858447   DNA repair protein RadA 
 vvi-u.5   100258398   uncharacterized LOC100258398 
 ghi-r.1   107913887   DNA repair protein RadA-like 
 ghi-r.1   107897358   DNA repair protein RadA 
 bna-r.1   106388475   DNA repair protein RadA-like 
 bna-r.1   106388422   DNA repair protein RadA 
 cit-r.1   102628276   uncharacterized LOC102628276 
 sly-u.5   101253170   uncharacterized LOC101253170 
 sot-r.1   102603127   DNA repair protein RadA homolog 
 nta-r.1   107830621   uncharacterized LOC107830621 
 nta-r.1   107793634   uncharacterized LOC107793634 
 osa-u.5   4340150   uncharacterized LOC4340150 
 zma-u.5   100384790   uncharacterized LOC100384790 
 tae-r.2   123155615   DNA repair protein RadA 
 tae-r.2   123150213   DNA repair protein RadA 
 tae-r.2   123167654   DNA repair protein RadA 
 hvu-r.1   123408137   DNA repair protein RadA 
 sbi-r.1   8068796   DNA repair protein RadA 
 bdi-r.1   100824150   DNA repair protein RadA 
 bdi-r.1   100840689   DNA repair protein RadA-like 
 cre-r.1   CHLRE_07g317908v5   uncharacterized protein 

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Top 50 coexpressed genes to 100794165 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100794165 (gma-u.5 coexpression data)

CoexMap"100794165"


gmaLOC100794165 | Entrez gene ID : 100794165      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000725 [list] [network] recombinational repair  (174 genes)  IEA  
GO CC
GO MF
GO:0140664 [list] [network] ATP-dependent DNA damage sensor activity  (31 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (116 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (756 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
Protein XP_003531642.1 [sequence] [blastp]
XP_006585561.1 [sequence] [blastp]
XP_006585562.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_003531642.1)
chlo 6,  mito 4  (predict for XP_006585561.1)
chlo 6,  cyto 2,  nucl 1  (predict for XP_006585562.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_003531642.1)
mito 7  (predict for XP_006585561.1)
other 5,  scret 3  (predict for XP_006585562.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100794165
gma-r.7
for
100794165
gma-m.5
for
100794165
gma-u.5
for
100791181
mtr-u.5
for
11427154
mtr-u.5
for
11424963
ppo-u.5
for
7475108
ath-u.5
for
AT5G50340
bra-r.6
for
103858447
vvi-u.5
for
100258398
ghi-r.1
for
107913887
ghi-r.1
for
107897358
bna-r.1
for
106388475
bna-r.1
for
106388422
cit-r.1
for
102628276
sly-u.5
for
101253170
sot-r.1
for
102603127
nta-r.1
for
107830621
nta-r.1
for
107793634
osa-u.5
for
4340150
zma-u.5
for
100384790
tae-r.2
for
123155615
tae-r.2
for
123150213
tae-r.2
for
123167654
hvu-r.1
for
123408137
sbi-r.1
for
8068796
bdi-r.1
for
100824150
bdi-r.1
for
100840689
cre-r.1
for
CHLRE_07g317908v5


Ortholog ID: 8192
Species gma gma mtr mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC100794165 LOC100791181 LOC11427154 LOC11424963 LOC7475108 AT5G50340 LOC103858447 LOC100258398 LOC107913887 LOC107897358 LOC106388475 LOC106388422 LOC102628276 LOC101253170 LOC102603127 LOC107830621 LOC107793634 LOC4340150 LOC100384790 LOC123155615 LOC123150213 LOC123167654 LOC123408137 LOC8068796 LOC100824150 LOC100840689 CHLRE_07g317908v5
Function* DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA uncharacterized LOC7475108 DNA repair protein RadA-like protein DNA repair protein RadA uncharacterized LOC100258398 DNA repair protein RadA-like DNA repair protein RadA DNA repair protein RadA-like DNA repair protein RadA uncharacterized LOC102628276 uncharacterized LOC101253170 DNA repair protein RadA homolog uncharacterized LOC107830621 uncharacterized LOC107793634 uncharacterized LOC4340150 uncharacterized LOC100384790 DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA DNA repair protein RadA-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 4
mtr03030 DNA replication 3
mtr03460 Fanconi anemia pathway 2
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03440 Homologous recombination 3
ppo03410 Base excision repair 3
ppo03460 Fanconi anemia pathway 2
ppo03030 DNA replication 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03430 Mismatch repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
ghi00061 Fatty acid biosynthesis 2
ghi00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 4
bna03083 Polycomb repressive complex 4
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 6
bna03083 Polycomb repressive complex 6
bna03013 Nucleocytoplasmic transport 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03020 RNA polymerase 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00290 Valine, leucine and isoleucine biosynthesis 3
tae00770 Pantothenate and CoA biosynthesis 3
tae01210 2-Oxocarboxylic acid metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03430 Mismatch repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
bdi03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100794165 100791181 11427154 11424963 7475108 835101 103858447 100258398 107913887 107897358 106388475 106388422 102628276 101253170 102603127 107830621 107793634 4340150 100384790 123155615 123150213 123167654 123408137 8068796 100824150 100840689 5726556
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