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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100794341   BRISC and BRCA1-A complex member 2 
 gma-r.7   100794341   BRISC and BRCA1-A complex member 2 
 gma-u.5   100814793   BRE domain-containing protein 
 mtr-u.5   11414408   BRISC and BRCA1-A complex member 2 
 ppo-u.5   7493974   uncharacterized LOC7493974 
 ppo-u.5   7490649   uncharacterized LOC7490649 
 ath-u.5   AT5G42470   BRCA1-A complex subunit BRE-like protein 
 vvi-u.5   100264259   uncharacterized LOC100264259 
 sly-u.5   101264320   uncharacterized LOC101264320 
 osa-u.5   4342073   uncharacterized LOC4342073 
 zma-u.5   100282640   protein BRE 

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Top 50 coexpressed genes to 100794341 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100794341 (gma-u.5 coexpression data)

CoexMap"100794341"


gmaLOC100794341 | Entrez gene ID : 100794341    
Species gma mtr ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03440 [list] [network] Homologous recombination (74 genes)
GO BP
GO:0006302 [list] [network] double-strand break repair  (211 genes)  IEA  
GO CC
GO:0070552 [list] [network] BRISC complex  (5 genes)  IEA  
GO:0070531 [list] [network] BRCA1-A complex  (10 genes)  IEA  
GO MF
Protein XP_014623285.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  chlo 1,  E.R. 1,  pero 1,  golg 1,  cyto_nucl 1  (predict for XP_014623285.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_014623285.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100794341

.
gma-r.7
for
100794341

.
gma-u.5
for
100814793

.
mtr-u.5
for
11414408

.
ppo-u.5
for
7493974

.
ppo-u.5
for
7490649

.
ath-u.5
for
AT5G42470

.
vvi-u.5
for
100264259

.
sly-u.5
for
101264320

.
osa-u.5
for
4342073

.
zma-u.5
for
100282640

.


Ortholog ID: 10350
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AT5G42470 LOC100814793 LOC100794341 LOC101264320 LOC4342073 LOC100282640 LOC103828022 LOC100264259 LOC7493974 LOC7490649 LOC11414408 LOC123148295 LOC123157368 LOC123408748 LOC121205059 LOC107918164 LOC106349523 LOC111205105 CHLRE_09g401367v5 LOC110431319 LOC102599655 LOC102631455 LOC100839893 LOC107815757
Function* BRCA1-A complex subunit BRE-like protein BRE domain-containing protein BRISC and BRCA1-A complex member 2 uncharacterized LOC101264320 uncharacterized LOC4342073 protein BRE BRISC and BRCA1-A complex member 2 uncharacterized LOC100264259 uncharacterized LOC7493974 uncharacterized LOC7490649 BRISC and BRCA1-A complex member 2 BRISC and BRCA1-A complex member 2 BRISC and BRCA1-A complex member 2 BRISC and BRCA1-A complex member 2 BRISC and BRCA1-A complex member 2 BRISC and BRCA1-A complex member 2 BRISC and BRCA1-A complex member 2 BRISC and BRCA1-A complex member 2 uncharacterized protein BRCA1-A complex subunit BRE BRCA1-A complex subunit BRE uncharacterized LOC102631455 BRISC and BRCA1-A complex member 2 uncharacterized LOC107815757
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
gma03440 Homologous recombination 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00260 Glycine, serine and threonine metabolism 2
sly00470 D-Amino acid metabolism 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 10
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04144 Endocytosis 2
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00270 Cysteine and methionine metabolism 3
tae00920 Sulfur metabolism 3
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00790 Folate biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna04144 Endocytosis 6
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna03050 Proteasome 3
bna00062 Fatty acid elongation 2
bna01212 Fatty acid metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
sot00190 Oxidative phosphorylation 2
sot03010 Ribosome 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 5
cit00010 Glycolysis / Gluconeogenesis 2
cit00190 Oxidative phosphorylation 2
cit04145 Phagosome 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834254 100814793 100794341 101264320 4342073 100282640 103828022 100264259 7493974 7490649 11414408 123148295 123157368 123408748 121205059 107918164 106349523 111205105 66054790 110431319 102599655 102631455 100839893 107815757
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