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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100795274   tyrosine decarboxylase 
 gma-r.7   100795274   tyrosine decarboxylase 
 gma-u.5   100787822   tyrosine decarboxylase 
 gma-u.5   100802993   tyrosine decarboxylase 
 gma-u.5   100791074   tyrosine decarboxylase 2 
 mtr-u.5   11419480   phenylacetaldehyde synthase 
 mtr-u.5   25486294   tyrosine decarboxylase 1 
 mtr-u.5   25486293   tyrosine decarboxylase 1 
 ppo-u.5   7459533   phenylacetaldehyde synthase 
 ath-u.5   AAS   Pyridoxal phosphate (PLP)-dependent transferases superfamily protein 
 ath-u.5   TYRDC   L-tyrosine decarboxylase 
 vvi-u.5   100251450   phenylacetaldehyde synthase 
 sly-u.5   101263431   tryptophan decarboxylase TDC1-like 
 sly-u.5   101244707   tyrosine decarboxylase 2 
 osa-u.5   4343080   tyrosine decarboxylase 
 zma-u.5   100274380   Tyrosine decarboxylase 1 

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Top 50 coexpressed genes to 100795274 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100795274 (gma-u.5 coexpression data)

CoexMap"100795274"


gmaLOC100795274 | Entrez gene ID : 100795274      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00350 [list] [network] Tyrosine metabolism (82 genes)
gmx00360 [list] [network] Phenylalanine metabolism (50 genes)
gmx00380 [list] [network] Tryptophan metabolism (95 genes)
gmx00901 [list] [network] Indole alkaloid biosynthesis (9 genes)
gmx00950 [list] [network] Isoquinoline alkaloid biosynthesis (46 genes)
gmx00965 [list] [network] Betalain biosynthesis (7 genes)
GO BP
GO:0006520 [list] [network] amino acid metabolic process  (586 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0016831 [list] [network] carboxy-lyase activity  (113 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (149 genes)  IEA  
Protein XP_003535055.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 8,  nucl 1,  mito 1,  vacu 1  (predict for XP_003535055.2)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_003535055.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100795274

.
gma-r.7
for
100795274

.
gma-u.5
for
100787822

.
gma-u.5
for
100802993

.
gma-u.5
for
100791074

.
mtr-u.5
for
11419480

.
mtr-u.5
for
25486294

.
mtr-u.5
for
25486293

.
ppo-u.5
for
7459533

.
ath-u.5
for
AAS

.
ath-u.5
for
TYRDC

.
vvi-u.5
for
100251450

.
sly-u.5
for
101263431

.
sly-u.5
for
101244707

.
osa-u.5
for
4343080

.
zma-u.5
for
100274380

.


Ortholog ID: 1051
Species ath ath gma gma sly osa zma bra ppo mtr mtr hvu ghi ghi bna cre sbi sot sot cit cit bdi nta nta
Symbol TYRDC AAS LOC100791074 LOC100787822 LOC101244707 LOC4343080 LOC100274380 LOC103838003 LOC18104108 LOC11423811 LOC11419480 LOC123395782 LOC107934214 LOC107953442 LOC111206442 CHLRE_01g028423v5 LOC8057946 LOC102592302 LOC102580311 LOC102616375 LOC102609487 LOC100822828 LOC107816983 LOC107821692
Function* L-tyrosine decarboxylase Pyridoxal phosphate (PLP)-dependent transferases superfamily protein tyrosine decarboxylase 2 tyrosine decarboxylase tyrosine decarboxylase 2 tyrosine decarboxylase Tyrosine decarboxylase 1 tyrosine decarboxylase 1 tyrosine decarboxylase 1 tyrosine decarboxylase 1 phenylacetaldehyde synthase tryptophan decarboxylase 2 tyrosine decarboxylase 1 tyrosine decarboxylase 1 tyrosine decarboxylase 2 uncharacterized protein tyrosine decarboxylase 1 tyrosine decarboxylase 1-like tyrosine decarboxylase 1-like tyrosine decarboxylase-like tyrosine decarboxylase 2 tyrosine decarboxylase 1 tyrosine decarboxylase 2 tyrosine decarboxylase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 3
gma04712 Circadian rhythm - plant 3
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00350 Tyrosine metabolism 4
gma00950 Isoquinoline alkaloid biosynthesis 4
gma00360 Phenylalanine metabolism 3
gma00380 Tryptophan metabolism 3
gma00901 Indole alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00561 Glycerolipid metabolism 2
osa00566 Sulfoquinovose metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00402 Benzoxazinoid biosynthesis 2
zma00999 Biosynthesis of various plant secondary metabolites 2
zma00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
bra00030 Pentose phosphate pathway 2
bra01200 Carbon metabolism 2
bra00350 Tyrosine metabolism 2
bra00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00350 Tyrosine metabolism 3
mtr00360 Phenylalanine metabolism 3
mtr00380 Tryptophan metabolism 3
mtr00901 Indole alkaloid biosynthesis 3
mtr00950 Isoquinoline alkaloid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 9
mtr00350 Tyrosine metabolism 5
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
mtr01200 Carbon metabolism 5
mtr00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 6
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00901 Indole alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 6
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00380 Tryptophan metabolism 2
ghi00901 Indole alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00350 Tyrosine metabolism 2
bna00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00591 Linoleic acid metabolism 3
sot00592 alpha-Linolenic acid metabolism 3
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00350 Tyrosine metabolism 2
cit00360 Phenylalanine metabolism 2
cit00380 Tryptophan metabolism 2
cit00901 Indole alkaloid biosynthesis 2
cit00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00901 Indole alkaloid biosynthesis 2
nta00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828986 816553 100791074 100787822 101244707 4343080 100274380 103838003 18104108 11423811 11419480 123395782 107934214 107953442 111206442 5715327 8057946 102592302 102580311 102616375 102609487 100822828 107816983 107821692
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