ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100795410	DCN1-like protein 2
gma-r.7	100795410	DCN1-like protein 2
gma-u.5	100527072	DCN1-like protein 2
mtr-u.5	25486918	DCN1-like protein 2
ppo-u.5	7462151	uncharacterized LOC7462151
ath-u.5	AT3G12760	defective in cullin neddylation protein
bra-r.6	103859464	DCN1-like protein 2
bra-r.6	103870227	DCN1-like protein 2
vvi-u.5	100245090	uncharacterized LOC100245090
ghi-r.1	107909152	DCN1-like protein 2
ghi-r.1	107928388	DCN1-like protein 2
bna-r.1	106397608	DCN1-like protein 2
bna-r.1	106389846	DCN1-like protein 2
cit-r.1	102630830	uncharacterized LOC102630830
sly-u.5	101253207	uncharacterized LOC101253207
sot-r.1	102603827	DCN1-like protein 1
sot-r.1	102606399	DCN1-like protein 2
nta-r.1	107790124	DCN1-like protein 1
nta-r.1	107804497	uncharacterized LOC107804497
nta-r.1	107814137	uncharacterized LOC107814137
osa-u.5	4340586	uncharacterized LOC4340586
zma-u.5	100283814	DCN1-like protein 2
zma-u.5	100194017	Defective in cullin neddylation protein
tae-r.2	123102797	DCN1-like protein 2
tae-r.2	123111003	DCN1-like protein 2
tae-r.2	123119929	DCN1-like protein 2
hvu-r.1	123452641	DCN1-like protein 2
sbi-r.1	8075721	DCN1-like protein 2
sbi-r.1	8057888	DCN1-like protein 2
bdi-r.1	100822780	DCN1-like protein 2
cre-r.1	CHLRE_01g014751v5	uncharacterized protein
cre-r.1	CHLRE_12g487400v5	uncharacterized protein
cre-r.1	CHLRE_01g014850v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0045116 [list] [network] protein neddylation

(14 genes)

IEA

GO CC

GO:0000151 [list] [network] ubiquitin ligase complex

(283 genes)

IEA

GO MF

GO:0097602 [list] [network] cullin family protein binding	(30 genes)	IEA
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding	(34 genes)	IEA
GO:0032182 [list] [network] ubiquitin-like protein binding	(119 genes)	IEA

Protein

XP_003531481.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 2, pero 2, chlo 1, nucl 1, cyto 1, E.R. 1, cyto_nucl 1, cyto_E.R. 1

(predict for XP_003531481.1)

Subcellular
localization
TargetP

mito 7, other 5

(predict for XP_003531481.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100795410	gma-r.7 for 100795410	gma-u.5 for 100527072	mtr-u.5 for 25486918	ppo-u.5 for 7462151	ath-u.5 for AT3G12760	bra-r.6 for 103859464	bra-r.6 for 103870227	vvi-u.5 for 100245090	ghi-r.1 for 107909152	ghi-r.1 for 107928388	bna-r.1 for 106397608	bna-r.1 for 106389846	cit-r.1 for 102630830	sly-u.5 for 101253207	sot-r.1 for 102603827	sot-r.1 for 102606399	nta-r.1 for 107790124	nta-r.1 for 107804497	nta-r.1 for 107814137	osa-u.5 for 4340586	zma-u.5 for 100283814	zma-u.5 for 100194017	tae-r.2 for 123102797	tae-r.2 for 123111003	tae-r.2 for 123119929	hvu-r.1 for 123452641	sbi-r.1 for 8075721	sbi-r.1 for 8057888	bdi-r.1 for 100822780	cre-r.1 for CHLRE_01g014751v5	cre-r.1 for CHLRE_12g487400v5	cre-r.1 for CHLRE_01g014850v5

Ortholog

Ortholog ID: 5105

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

DCN1-like protein 2

uncharacterized LOC7462151

defective in cullin neddylation protein

DCN1-like protein 2

uncharacterized LOC100245090

DCN1-like protein 2

uncharacterized LOC102630830

uncharacterized LOC101253207

DCN1-like protein 1

DCN1-like protein 2

DCN1-like protein 1

uncharacterized LOC107804497

DCN1-like protein 1

uncharacterized LOC4340586

DCN1-like protein 2

Defective in cullin neddylation protein

DCN1-like protein 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	7
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3
ath04712	Circadian rhythm - plant	3
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	4
bna03083	Polycomb repressive complex	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	6
bna04136	Autophagy - other	6
bna04382	Cornified envelope formation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	2
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	4
osa04141	Protein processing in endoplasmic reticulum	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	7
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae04144	Endocytosis	2
tae03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae04144	Endocytosis	3
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2
sbi00330	Arginine and proline metabolism	2
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	12
cre04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

100795410

100527072

25486918

7462151

820458

103859464

103870227

100245090

107909152

107928388

106389846

106356790

102630830

101253207

102603827

102606399

107790124

107804497

107787528

4340586

100283814

100194017

123102797

123111003

123119929

123452641

8075721

8057888

100822780

66051995

66055406

5715095

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100795410 (gma-u.5 coexpression data)

Top 50 enrichment test to 100795410 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	1	1	1	2	1	2	2	1	1	2	3	1	2	3	1	2	1	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100795410 (gma-u.5 coexpression data)

Top 50 enrichment test to 100795410 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**