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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100796560   nucleoporin NUP188 
 gma-r.7   100796560   nucleoporin NUP188 
 gma-m.5   100796560   nucleoporin NUP188 
 mtr-u.5   11442832   uncharacterized LOC11442832 
 ppo-u.5   7472148   uncharacterized LOC7472148 
 ath-u.5   AT4G38760   nucleoporin (DUF3414) 
 bra-r.6   103828087   uncharacterized LOC103828087 
 vvi-u.5   100264071   uncharacterized LOC100264071 
 ghi-r.1   107945049   uncharacterized LOC107945049 
 ghi-r.1   107927750   uncharacterized LOC107927750 
 bna-r.1   106349479   uncharacterized LOC106349479 
 bna-r.1   106410131   uncharacterized LOC106410131 
 cit-r.1   102622006   uncharacterized LOC102622006 
 sly-u.5   101245721   uncharacterized LOC101245721 
 sot-r.1   102591984   uncharacterized LOC102591984 
 nta-r.1   107815035   uncharacterized LOC107815035 
 nta-r.1   107807932   uncharacterized LOC107807932 
 osa-u.5   9269589   uncharacterized LOC9269589 
 zma-u.5   100279122   uncharacterized LOC100279122 
 tae-r.2   123165703   uncharacterized LOC123165703 
 tae-r.2   123159757   uncharacterized LOC123159757 
 tae-r.2   123149923   uncharacterized LOC123149923 
 hvu-r.1   123413161   uncharacterized LOC123413161 
 sbi-r.1   8067606   uncharacterized LOC8067606 
 bdi-r.1   100837705   uncharacterized LOC100837705 

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Top 50 coexpressed genes to 100796560 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100796560 (gma-u.5 coexpression data)

CoexMap"100796560"


gmaLOC100796560 | Entrez gene ID : 100796560      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03013 [list] [network] Nucleocytoplasmic transport (189 genes)
GO BP
GO:0006405 [list] [network] RNA export from nucleus  (78 genes)  IEA  
GO:0006606 [list] [network] protein import into nucleus  (90 genes)  IEA  
GO CC
GO:0044611 [list] [network] nuclear pore inner ring  (3 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (30 genes)  IEA  
Protein XP_006592039.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  nucl 2,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_006592039.1)
Subcellular
localization
TargetP
other 6  (predict for XP_006592039.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100796560
gma-r.7
for
100796560
gma-m.5
for
100796560
mtr-u.5
for
11442832
ppo-u.5
for
7472148
ath-u.5
for
AT4G38760
bra-r.6
for
103828087
vvi-u.5
for
100264071
ghi-r.1
for
107945049
ghi-r.1
for
107927750
bna-r.1
for
106349479
bna-r.1
for
106410131
cit-r.1
for
102622006
sly-u.5
for
101245721
sot-r.1
for
102591984
nta-r.1
for
107815035
nta-r.1
for
107807932
osa-u.5
for
9269589
zma-u.5
for
100279122
tae-r.2
for
123165703
tae-r.2
for
123159757
tae-r.2
for
123149923
hvu-r.1
for
123413161
sbi-r.1
for
8067606
bdi-r.1
for
100837705


Ortholog ID: 11389
Species gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100796560 LOC11442832 LOC7472148 AT4G38760 LOC103828087 LOC100264071 LOC107945049 LOC107927750 LOC106349479 LOC106410131 LOC102622006 LOC101245721 LOC102591984 LOC107815035 LOC107807932 LOC9269589 LOC100279122 LOC123165703 LOC123159757 LOC123149923 LOC123413161 LOC8067606 LOC100837705
Function* nucleoporin NUP188 uncharacterized LOC11442832 uncharacterized LOC7472148 nucleoporin (DUF3414) uncharacterized LOC103828087 uncharacterized LOC100264071 uncharacterized LOC107945049 uncharacterized LOC107927750 uncharacterized LOC106349479 uncharacterized LOC106410131 uncharacterized LOC102622006 uncharacterized LOC101245721 uncharacterized LOC102591984 uncharacterized LOC107815035 uncharacterized LOC107807932 uncharacterized LOC9269589 uncharacterized LOC100279122 uncharacterized LOC123165703 uncharacterized LOC123159757 uncharacterized LOC123149923 uncharacterized LOC123413161 uncharacterized LOC8067606 uncharacterized LOC100837705
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr04120 Ubiquitin mediated proteolysis 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 5
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 6
ghi04120 Ubiquitin mediated proteolysis 4
ghi03020 RNA polymerase 2
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 6
ghi03013 Nucleocytoplasmic transport 6
ghi03020 RNA polymerase 2
ghi03015 mRNA surveillance pathway 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03440 Homologous recombination 2
bna03450 Non-homologous end-joining 2
bna03420 Nucleotide excision repair 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03013 Nucleocytoplasmic transport 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
sly03008 Ribosome biogenesis in eukaryotes 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03013 Nucleocytoplasmic transport 3
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100796560 11442832 7472148 830031 103828087 100264071 107945049 107927750 106349479 106410131 102622006 101245721 102591984 107815035 107807932 9269589 100279122 123165703 123159757 123149923 123413161 8067606 100837705
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