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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100797078   DNA-directed RNA polymerase subunit 10-like protein 
 gma-r.7   100797078   DNA-directed RNA polymerase subunit 10-like protein 
 gma-u.5   100500450   DNA-directed RNA polymerase subunit 10-like protein 
 gma-u.5   100775415   DNA-directed RNA polymerase subunit 10-like protein 
 mtr-u.5   25492856   DNA-directed RNA polymerase subunit 10-like protein 
 mtr-u.5   11405864   DNA-directed RNA polymerase subunit 10-like protein 
 ppo-u.5   18100279   DNA-directed RNA polymerases I, II, and III subunit RPABC5 
 ppo-u.5   7491904   DNA-directed RNA polymerases I, II, and III subunit RPABC5 
 ath-u.5   NRPB10   RNA polymerases N / 8 kDa subunit 
 vvi-u.5   100267114   DNA-directed RNA polymerase subunit 10-like protein 
 sly-u.5   101251196   DNA-directed RNA polymerases I, II, and III subunit RPABC5 
 osa-u.5   4351671   DNA-directed RNA polymerases I, II, and III subunit RPABC5 
 osa-u.5   4349985   DNA-directed RNA polymerases I, II, and III subunit RPABC5 
 zma-u.5   113633883   uncharacterized LOC113633883 
 zma-u.5   100286035   uncharacterized LOC100286035 
 zma-u.5   100281783   DNA-directed RNA polymerase II 8.2 kDa polypeptide 

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Top 50 coexpressed genes to 100797078 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100797078 (gma-u.5 coexpression data)

CoexMap"100797078"


gmaLOC100797078 | Entrez gene ID : 100797078      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 2 2 1 1 1 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03020 [list] [network] RNA polymerase (81 genes)
gmx03420 [list] [network] Nucleotide excision repair (129 genes)
GO BP
GO:0042797 [list] [network] tRNA transcription by RNA polymerase III  (12 genes)  IEA  
GO:0006360 [list] [network] transcription by RNA polymerase I  (21 genes)  IEA  
GO:0006366 [list] [network] transcription by RNA polymerase II  (130 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (27 genes)  IEA  
GO:0005665 [list] [network] RNA polymerase II, core complex  (38 genes)  IEA  
GO:0005666 [list] [network] RNA polymerase III complex  (45 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003522765.1 [sequence] [blastp]
XP_006578280.1 [sequence] [blastp]
XP_006578281.1 [sequence] [blastp]
XP_014630051.1 [sequence] [blastp]
XP_014630052.1 [sequence] [blastp]
XP_014630053.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 1,  cyto 1,  plas 1,  extr 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_003522765.1)
nucl 6,  mito 1,  cyto 1,  plas 1,  extr 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_006578280.1)
nucl 6,  mito 1,  cyto 1,  plas 1,  extr 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_006578281.1)
nucl 6,  mito 1,  cyto 1,  plas 1,  extr 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_014630051.1)
nucl 6,  mito 1,  cyto 1,  plas 1,  extr 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_014630052.1)
nucl 6,  mito 1,  cyto 1,  plas 1,  extr 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  golg_plas 1,  cyto_plas 1  (predict for XP_014630053.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003522765.1)
other 7  (predict for XP_006578280.1)
other 7  (predict for XP_006578281.1)
other 7  (predict for XP_014630051.1)
other 7  (predict for XP_014630052.1)
other 7  (predict for XP_014630053.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100797078

.
gma-r.7
for
100797078

.
gma-u.5
for
100500450

.
gma-u.5
for
100775415

.
mtr-u.5
for
25492856

.
mtr-u.5
for
11405864

.
ppo-u.5
for
18100279

.
ppo-u.5
for
7491904

.
ath-u.5
for
NRPB10

.
vvi-u.5
for
100267114

.
sly-u.5
for
101251196

.
osa-u.5
for
4351671

.
osa-u.5
for
4349985

.
zma-u.5
for
113633883

.
zma-u.5
for
100286035

.
zma-u.5
for
100281783

.


Ortholog ID: 3857
Species ath gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi bdi
Symbol NRPB10 LOC100797078 LOC101251196 LOC4349985 LOC4351671 LOC100286035 LOC113633883 LOC103836229 LOC103871905 LOC100267114 LOC18100279 LOC7491904 LOC11405864 LOC123111008 LOC123102857 LOC123396538 LOC123409349 LOC107909683 LOC121210970 LOC106366999 LOC106362151 CHLRE_13g571650v5 LOC8076306 LOC102596451 LOC102624903 LOC100828005 LOC100822387
Function* RNA polymerases N / 8 kDa subunit DNA-directed RNA polymerase subunit 10-like protein DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 uncharacterized LOC100286035 uncharacterized LOC113633883 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerase subunit 10-like protein DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerase subunit 10-like protein DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5 uncharacterized protein DNA-directed RNA polymerases II, IV and V subunit 10 DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerase subunit 10-like protein DNA-directed RNA polymerases I, II, and III subunit RPABC5 DNA-directed RNA polymerases I, II, and III subunit RPABC5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03020 RNA polymerase 3
ath03420 Nucleotide excision repair 3
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
sly03040 Spliceosome 3
sly03020 RNA polymerase 2
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03040 Spliceosome 2
osa00240 Pyrimidine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03010 Ribosome 3
zma03008 Ribosome biogenesis in eukaryotes 3
zma03018 RNA degradation 3
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 11
zma03018 RNA degradation 4
zma03008 Ribosome biogenesis in eukaryotes 2
zma03020 RNA polymerase 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 4
bra03420 Nucleotide excision repair 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03040 Spliceosome 4
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr03040 Spliceosome 4
mtr03020 RNA polymerase 3
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 8
tae03420 Nucleotide excision repair 8
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 7
tae03420 Nucleotide excision repair 7
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03010 Ribosome 3
hvu03020 RNA polymerase 3
hvu03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 2
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 5
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03020 RNA polymerase 4
bna03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 5
cre03008 Ribosome biogenesis in eukaryotes 4
cre03420 Nucleotide excision repair 3
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 6
sbi03010 Ribosome 4
sbi03420 Nucleotide excision repair 3
sbi03020 RNA polymerase 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03010 Ribosome 2
sot03018 RNA degradation 2
sot03020 RNA polymerase 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit03020 RNA polymerase 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 3
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837690 100797078 101251196 4349985 4351671 100286035 113633883 103836229 103871905 100267114 18100279 7491904 11405864 123111008 123102857 123396538 123409349 107909683 121210970 106366999 106362151 5719150 8076306 102596451 102624903 100828005 100822387
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