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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100797079   COP9 signalosome complex subunit 6a 
 gma-r.7   100797079   COP9 signalosome complex subunit 6a 
 gma-m.5   100797079   COP9 signalosome complex subunit 6a 
 gma-u.5   100786026   COP9 signalosome complex subunit 6a 
 mtr-u.5   25488496   COP9 signalosome complex subunit 6a 
 ppo-u.5   18103578   COP9 signalosome complex subunit 6a 
 ath-u.5   CSN6B   COP9 signalosome subunit 6B 
 ath-u.5   CSN6A   COP9 signalosome subunit 6A 
 vvi-u.5   100246357   COP9 signalosome complex subunit 6a 
 sly-u.5   101259087   COP9 signalosome complex subunit 6a 
 osa-u.5   4345944   COP9 signalosome complex subunit 6-like 
 zma-u.5   100284689   COP9 signalosome complex subunit 6a 
 zma-u.5   100283126   uncharacterized LOC100283126 

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Top 50 coexpressed genes to 100797079 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100797079 (gma-u.5 coexpression data)

CoexMap"100797079"


gmaLOC100797079 | Entrez gene ID : 100797079      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000338 [list] [network] protein deneddylation  (11 genes)  IEA  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (19 genes)  IEA  
GO MF
GO:0008237 [list] [network] metallopeptidase activity  (172 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003522838.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 2,  E.R._vacu 1  (predict for XP_003522838.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_003522838.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100797079
gma-r.7
for
100797079
gma-m.5
for
100797079
gma-u.5
for
100786026
mtr-u.5
for
25488496
ppo-u.5
for
18103578
ath-u.5
for
CSN6B
ath-u.5
for
CSN6A
vvi-u.5
for
100246357
sly-u.5
for
101259087
osa-u.5
for
4345944
zma-u.5
for
100284689
zma-u.5
for
100283126


Ortholog ID: 5352
Species gma gma mtr ppo ath ath bra bra vvi ghi ghi bna cit sly sot nta nta osa zma zma tae tae hvu sbi bdi cre cre
Symbol LOC100786026 LOC100797079 LOC25488496 LOC18103578 CSN6B CSN6A LOC103866136 LOC103861629 LOC100246357 LOC107893551 LOC107926123 LOC106437668 LOC102619095 LOC101259087 LOC102584188 LOC107770370 LOC107824680 LOC4345944 LOC100284689 LOC100283126 LOC123150993 LOC123166148 LOC123409568 LOC8067010 LOC100836366 CHLRE_11g467645v5 CHLRE_11g467647v5
Function* COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome subunit 6B COP9 signalosome subunit 6A COP9 signalosome complex subunit 6b COP9 signalosome complex subunit 6b COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a-like COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6-like COP9 signalosome complex subunit 6a uncharacterized LOC100283126 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 6 COP9 signalosome complex subunit 6a COP9 signalosome complex subunit 6a uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
gma04120 Ubiquitin mediated proteolysis 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
ath03040 Spliceosome 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 2
bra01200 Carbon metabolism 2
bra01210 2-Oxocarboxylic acid metabolism 2
bra00190 Oxidative phosphorylation 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 6
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 7
bna04145 Phagosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 7
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01210 2-Oxocarboxylic acid metabolism 4
nta01230 Biosynthesis of amino acids 4
nta00020 Citrate cycle (TCA cycle) 2
nta01200 Carbon metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
zma00020 Citrate cycle (TCA cycle) 6
zma01200 Carbon metabolism 6
zma01210 2-Oxocarboxylic acid metabolism 6
zma00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 3
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
zma00860 Porphyrin metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 5
hvu00510 N-Glycan biosynthesis 2
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 4
sbi03010 Ribosome 3
sbi04145 Phagosome 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
bdi03010 Ribosome 3
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 10
cre04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100786026 100797079 25488496 18103578 828749 835727 103866136 103861629 100246357 107893551 107926123 106437668 102619095 101259087 102584188 107770370 107824680 4345944 100284689 100283126 123150993 123166148 123409568 8067010 100836366 66055232 5724358
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