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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100797239   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 gma-r.7   100797239   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 gma-m.5   100797239   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 gma-u.5   121174625   uncharacterized LOC121174625 
 gma-u.5   100808340   ubiquitin carboxyl-terminal hydrolase MINDY-2 
 mtr-u.5   11437518   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 ppo-u.5   7479246   uncharacterized LOC7479246 
 ppo-u.5   7490923   uncharacterized LOC7490923 
 ath-u.5   AT4G11860   FAM63A-like protein (DUF544) 
 ath-u.5   AT4G22960   FAM63A-like protein (DUF544) 
 vvi-u.5   100263264   uncharacterized LOC100263264 
 sly-u.5   101249947   uncharacterized LOC101249947 
 osa-u.5   4342044   uncharacterized LOC4342044 
 zma-u.5   103629574   ubiquitin carboxyl-terminal hydrolase MINDY-1 
 zma-u.5   100279905   uncharacterized LOC100279905 

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Top 50 coexpressed genes to 100797239 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100797239 (gma-u.5 coexpression data)

CoexMap"100797239"


gmaLOC100797239 | Entrez gene ID : 100797239      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 1 2 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071108 [list] [network] protein K48-linked deubiquitination  (12 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO:0071944 [list] [network] cell periphery  (2303 genes)  IEA  
GO MF
GO:0016807 [list] [network] cysteine-type carboxypeptidase activity  (2 genes)  IEA  
GO:1990380 [list] [network] K48-linked deubiquitinase activity  (5 genes)  IEA  
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (98 genes)  IEA  
Protein XP_003538713.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for XP_003538713.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_003538713.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100797239

.
gma-r.7
for
100797239

.
gma-m.5
for
100797239

.
gma-u.5
for
121174625

.
gma-u.5
for
100808340

.
mtr-u.5
for
11437518

.
ppo-u.5
for
7479246

.
ppo-u.5
for
7490923

.
ath-u.5
for
AT4G11860

.
ath-u.5
for
AT4G22960

.
vvi-u.5
for
100263264

.
sly-u.5
for
101249947

.
osa-u.5
for
4342044

.
zma-u.5
for
103629574

.
zma-u.5
for
100279905

.


Ortholog ID: 6032
Species ath ath gma gma sly osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G11860 AT4G22960 LOC100797239 LOC121174625 LOC101249947 LOC4342044 LOC103629574 LOC100279905 LOC103839924 LOC100263264 LOC7490923 LOC7479246 LOC11437518 LOC123159049 LOC123166262 LOC123411033 LOC107923040 LOC107896488 LOC106367017 LOC106375762 CHLRE_06g304850v5 LOC8064982 LOC102600194 LOC102627362 LOC100832934 LOC107780665 LOC107824775
Function* FAM63A-like protein (DUF544) FAM63A-like protein (DUF544) ubiquitin carboxyl-terminal hydrolase MINDY-2 uncharacterized LOC121174625 uncharacterized LOC101249947 uncharacterized LOC4342044 ubiquitin carboxyl-terminal hydrolase MINDY-1 uncharacterized LOC100279905 ubiquitin carboxyl-terminal hydrolase MINDY-1 uncharacterized LOC100263264 uncharacterized LOC7490923 uncharacterized LOC7479246 ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-2 ubiquitin carboxyl-terminal hydrolase MINDY-2 ubiquitin carboxyl-terminal hydrolase MINDY-2 ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-1 ubiquitin carboxyl-terminal hydrolase MINDY-1-like uncharacterized protein ubiquitin carboxyl-terminal hydrolase MINDY-1 protein FAM63A uncharacterized LOC102627362 ubiquitin carboxyl-terminal hydrolase MINDY-2 uncharacterized LOC107780665 uncharacterized LOC107824775
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr00562 Inositol phosphate metabolism 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03250 Viral life cycle - HIV-1 4
tae03272 Virion - Hepatitis viruses 4
tae04144 Endocytosis 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi04981 Folate transport and metabolism 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 4
ghi00270 Cysteine and methionine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
ghi03040 Spliceosome 3
ghi00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03272 Virion - Hepatitis viruses 3
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 7
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit04120 Ubiquitin mediated proteolysis 3
cit03013 Nucleocytoplasmic transport 2
cit00562 Inositol phosphate metabolism 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826793 828395 100797239 121174625 101249947 4342044 103629574 100279905 103839924 100263264 7490923 7479246 11437518 123159049 123166262 123411033 107923040 107896488 106367017 106375762 66053890 8064982 102600194 102627362 100832934 107780665 107824775
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