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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100797972   RNA-directed DNA methylation 4 
 gma-r.7   100797972   RNA-directed DNA methylation 4 
 mtr-u.5   11415633   RNA-directed DNA methylation 4 
 mtr-u.5   25497934   RNA-directed DNA methylation 4 
 mtr-u.5   25497936   RNA-directed DNA methylation 4 
 ppo-u.5   7498135   RNA-directed DNA methylation 4 
 ath-u.5   RDM4   RNA-directed DNA methylation 4 
 bra-r.6   103867967   RNA-directed DNA methylation 4 
 vvi-u.5   104879519   RNA-directed DNA methylation 4 
 ghi-r.1   107927024   RNA-directed DNA methylation 4 
 ghi-r.1   107935046   RNA-directed DNA methylation 4 
 bna-r.1   125603919   RNA-directed DNA methylation 4-like 
 bna-r.1   106451435   RNA-directed DNA methylation 4 
 bna-r.1   106424912   RNA-directed DNA methylation 4 
 cit-r.1   102623784   RNA-directed DNA methylation 4 
 sly-u.5   101247931   RNA-directed DNA methylation 4 
 sot-r.1   102600926   RNA-directed DNA methylation 4 
 nta-r.1   107829275   RNA-directed DNA methylation 4-like 
 nta-r.1   107806199   RNA-directed DNA methylation 4 
 nta-r.1   107787489   uncharacterized LOC107787489 
 osa-u.5   4349576   RNA-directed DNA methylation 4 
 osa-u.5   4351292   RNA-directed DNA methylation 4 
 zma-u.5   100193832   uncharacterized LOC100193832 
 tae-r.2   123086347   RNA-directed DNA methylation 4 
 tae-r.2   123096657   RNA-directed DNA methylation 4 
 tae-r.2   123091697   RNA-directed DNA methylation 4 
 hvu-r.1   123448153   RNA-directed DNA methylation 4 
 sbi-r.1   8070338   RNA-directed DNA methylation 4 
 sbi-r.1   8067594   RNA-directed DNA methylation 4 
 sbi-r.1   8079989   RNA-directed DNA methylation 4 
 bdi-r.1   100844821   RNA-directed DNA methylation 4 

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Top 50 coexpressed genes to 100797972 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100797972 (gma-u.5 coexpression data)

CoexMap"100797972"


gmaLOC100797972 | Entrez gene ID : 100797972      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 1 1 1 2 3 1 1 1 3 2 1 3 1 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_003554524.1 [sequence] [blastp]
XP_014627413.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  plas 1,  golg_plas 1  (predict for XP_003554524.1)
nucl 9,  chlo 1,  vacu 1  (predict for XP_014627413.1)
Subcellular
localization
TargetP
chlo 8,  other 3  (predict for XP_003554524.1)
other 6,  chlo 4  (predict for XP_014627413.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100797972
gma-r.7
for
100797972
mtr-u.5
for
11415633
mtr-u.5
for
25497934
mtr-u.5
for
25497936
ppo-u.5
for
7498135
ath-u.5
for
RDM4
bra-r.6
for
103867967
vvi-u.5
for
104879519
ghi-r.1
for
107927024
ghi-r.1
for
107935046
bna-r.1
for
125603919
bna-r.1
for
106451435
bna-r.1
for
106424912
cit-r.1
for
102623784
sly-u.5
for
101247931
sot-r.1
for
102600926
nta-r.1
for
107829275
nta-r.1
for
107806199
nta-r.1
for
107787489
osa-u.5
for
4349576
osa-u.5
for
4351292
zma-u.5
for
100193832
tae-r.2
for
123086347
tae-r.2
for
123096657
tae-r.2
for
123091697
hvu-r.1
for
123448153
sbi-r.1
for
8070338
sbi-r.1
for
8067594
sbi-r.1
for
8079989
bdi-r.1
for
100844821


Ortholog ID: 7167
Species gma mtr mtr mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta nta osa osa zma tae tae tae hvu sbi sbi sbi bdi
Symbol LOC100797972 LOC11415633 LOC25497934 LOC25497936 LOC7498135 RDM4 LOC103867967 LOC104879519 LOC107927024 LOC107935046 LOC125603919 LOC106424912 LOC102623784 LOC101247931 LOC102600926 LOC107829275 LOC107806199 LOC107787489 LOC4349576 LOC4351292 LOC100193832 LOC123086347 LOC123096657 LOC123091697 LOC123448153 LOC8070338 LOC8067594 LOC8079989 LOC100844821
Function* RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4-like RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4-like RNA-directed DNA methylation 4 uncharacterized LOC107787489 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 uncharacterized LOC100193832 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4 RNA-directed DNA methylation 4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 4
ppo03020 RNA polymerase 3
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
bna03040 Spliceosome 2
bna03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03083 Polycomb repressive complex 3
sot03018 RNA degradation 2
sot03082 ATP-dependent chromatin remodeling 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03020 RNA polymerase 3
osa03420 Nucleotide excision repair 3
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03022 Basal transcription factors 3
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00640 Propanoate metabolism 2
sbi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100797972 11415633 25497934 25497936 7498135 817578 103867967 104879519 107927024 107935046 125603919 106424912 102623784 101247931 102600926 107829275 107806199 107787489 4349576 4351292 100193832 123086347 123096657 123091697 123448153 8070338 8067594 8079989 100844821
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