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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799081   cysteine synthase 2 
 gma-r.7   100799081   cysteine synthase 2 
 gma-m.5   100799081   cysteine synthase 2 
 mtr-u.5   11436130   cysteine synthase 2 
 ppo-u.5   7485110   cysteine synthase 2 
 ath-u.5   AT1G55880   Pyridoxal-5'-phosphate-dependent enzyme family protein 
 vvi-u.5   100260099   cysteine synthase 2 
 sly-u.5   101253301   cysteine synthase 2 
 osa-u.5   4332062   cysteine synthase 2 
 zma-u.5   100193476   uncharacterized LOC100193476 

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Top 50 coexpressed genes to 100799081 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799081 (gma-u.5 coexpression data)

CoexMap"100799081"


gmaLOC100799081 | Entrez gene ID : 100799081      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00270 [list] [network] Cysteine and methionine metabolism (212 genes)
gmx00920 [list] [network] Sulfur metabolism (60 genes)
gmx01200 [list] [network] Carbon metabolism (489 genes)
gmx01230 [list] [network] Biosynthesis of amino acids (403 genes)
gmx01320 [list] [network] Sulfur cycle (29 genes)
GO BP
GO:0006535 [list] [network] cysteine biosynthetic process from serine  (28 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
Protein XP_003544654.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 2,  extr 1,  E.R._vacu 1  (predict for XP_003544654.1)
Subcellular
localization
TargetP
other 4  (predict for XP_003544654.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799081

.
gma-r.7
for
100799081

.
gma-m.5
for
100799081

.
mtr-u.5
for
11436130

.
ppo-u.5
for
7485110

.
ath-u.5
for
AT1G55880

.
vvi-u.5
for
100260099

.
sly-u.5
for
101253301

.
osa-u.5
for
4332062

.
zma-u.5
for
100193476

.


Ortholog ID: 11092
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G55880 LOC100799081 LOC101253301 LOC4332062 LOC100193476 LOC103871013 LOC100260099 LOC7485110 LOC11436130 LOC123098234 LOC123085269 LOC123449306 LOC107931162 LOC107922294 LOC106415385 LOC125610056 CHLRE_16g664250v5 LOC8056886 LOC102585362 LOC102610473 LOC100832897 LOC107826345 LOC107776762
Function* Pyridoxal-5'-phosphate-dependent enzyme family protein cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 uncharacterized LOC100193476 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2-like uncharacterized protein cysteine synthase cysteine synthase 2 cysteine synthase 2 cysteine synthase 2 cysteine synthase 2-like cysteine synthase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00270 Cysteine and methionine metabolism 3
tae00920 Sulfur metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00270 Cysteine and methionine metabolism 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03420 Nucleotide excision repair 2
hvu03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi00270 Cysteine and methionine metabolism 2
ghi00920 Sulfur metabolism 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna00270 Cysteine and methionine metabolism 2
bna00920 Sulfur metabolism 2
bna01200 Carbon metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta01200 Carbon metabolism 3
nta01230 Biosynthesis of amino acids 3
nta03060 Protein export 2
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842038 100799081 101253301 4332062 100193476 103871013 100260099 7485110 11436130 123098234 123085269 123449306 107931162 107922294 106415385 125610056 5726998 8056886 102585362 102610473 100832897 107826345 107776762
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