ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100799166	protease Do-like 2, chloroplastic
gma-r.7	100799166	protease Do-like 2, chloroplastic
gma-u.5	100796340	protease Do-like 2, chloroplastic
mtr-u.5	25484786	protease Do-like 2, chloroplastic
ppo-u.5	18111288	protease Do-like 2, chloroplastic
ppo-u.5	7457968	protease Do-like 2, chloroplastic
ath-u.5	DEG2	DEGP protease 2
vvi-u.5	100251195	protease Do-like 2, chloroplastic
sly-u.5	101261957	protease Do-like 2, chloroplastic
sly-u.5	101258381	protease Do-like 2, chloroplastic
osa-u.5	9270258	protease Do-like 2, chloroplastic
zma-u.5	100280147	Protease Do-like 2 chloroplastic

functional annotation

KEGG

GO BP

GO:0006508 [list] [network] proteolysis

(1383 genes)

IEA

GO CC

GO MF

GO:0004252 [list] [network] serine-type endopeptidase activity	(199 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_003536894.1 [sequence] [blastp]
XP_040862206.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1	(predict for XP_003536894.1)
chlo 5, cyto 4, nucl 1, cysk 1, cysk_nucl 1	(predict for XP_040862206.1)

Subcellular
localization
TargetP

chlo 8	(predict for XP_003536894.1)
other 5	(predict for XP_040862206.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100799166	gma-r.7 for 100799166	gma-u.5 for 100796340	mtr-u.5 for 25484786	ppo-u.5 for 18111288	ppo-u.5 for 7457968	ath-u.5 for DEG2	vvi-u.5 for 100251195	sly-u.5 for 101261957	sly-u.5 for 101258381	osa-u.5 for 9270258	zma-u.5 for 100280147

Ortholog ID: 7556

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

DEG2

Function^*

protease Do-like 2, chloroplastic

DEGP protease 2

protease Do-like 2, chloroplastic

Protease Do-like 2 chloroplastic

protease Do-like 2, chloroplastic

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00860	Porphyrin metabolism	3
ppo03018	RNA degradation	2
ppo00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	10
ath00970	Aminoacyl-tRNA biosynthesis	2
ath03060	Protein export	2
ath00860	Porphyrin metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2
bra00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2
ghi00190	Oxidative phosphorylation	2
ghi00195	Photosynthesis	2
ghi00750	Vitamin B6 metabolism	2
ghi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	10

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00970	Aminoacyl-tRNA biosynthesis	4
cit00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00970	Aminoacyl-tRNA biosynthesis	6
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	4
sly00260	Glycine, serine and threonine metabolism	3
sly00630	Glyoxylate and dicarboxylate metabolism	3
sly00670	One carbon pool by folate	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03060	Protein export	3
sot00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00030	Pentose phosphate pathway	2
nta00710	Carbon fixation by Calvin cycle	2
nta01200	Carbon metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	3
zma03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	9
tae03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00860	Porphyrin metabolism	3
hvu03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	8
sbi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	2

Expression

Expression pattern

Entrez Gene ID^*

100796340

100799166

25484786

18111288

7457968

819406

103843213

100251195

107930128

107936847

106436152

106392310

102627164

101261957

101258381

102605987

102591219

107816989

107807560

9270258

100280147

123038322

123180449

123424918

8075962

100838681

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100799166 (gma-u.5 coexpression data)

Top 50 enrichment test to 100799166 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	3	1	2	1	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100799166 (gma-u.5 coexpression data)

Top 50 enrichment test to 100799166 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**