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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799656   ubiquitin carboxyl-terminal hydrolase 24 
 gma-r.7   100799656   ubiquitin carboxyl-terminal hydrolase 24 
 gma-m.5   100799656   ubiquitin carboxyl-terminal hydrolase 24 
 gma-u.5   100816791   ubiquitin carboxyl-terminal hydrolase 24 
 mtr-u.5   11423837   ubiquitin carboxyl-terminal hydrolase 24 
 ppo-u.5   7460215   ubiquitin carboxyl-terminal hydrolase 24 
 ath-u.5   UBP24   ubiquitin-specific protease 24 
 vvi-u.5   100261998   ubiquitin carboxyl-terminal hydrolase 24 
 sly-u.5   101266480   ubiquitin carboxyl-terminal hydrolase 24-like 
 sly-u.5   101257506   ubiquitin carboxyl-terminal hydrolase 24-like 
 osa-u.5   4344181   ubiquitin carboxyl-terminal hydrolase 24 
 zma-u.5   103633533   ubiquitin carboxyl-terminal hydrolase 24 
 zma-u.5   100384703   ubiquitin carboxyl-terminal hydrolase 

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Top 50 coexpressed genes to 100799656 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799656 (gma-u.5 coexpression data)

CoexMap"100799656"


gmaLOC100799656 | Entrez gene ID : 100799656      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016579 [list] [network] protein deubiquitination  (128 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (98 genes)  IEA  
Protein XP_003534373.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_003534373.2)
Subcellular
localization
TargetP
other 6,  chlo 5  (predict for XP_003534373.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799656

.
gma-r.7
for
100799656

.
gma-m.5
for
100799656

.
gma-u.5
for
100816791

.
mtr-u.5
for
11423837

.
ppo-u.5
for
7460215

.
ath-u.5
for
UBP24

.
vvi-u.5
for
100261998

.
sly-u.5
for
101266480

.
sly-u.5
for
101257506

.
osa-u.5
for
4344181

.
zma-u.5
for
103633533

.
zma-u.5
for
100384703

.


Ortholog ID: 5156
Species ath gma gma sly sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol UBP24 LOC100816791 LOC100799656 LOC101257506 LOC101266480 LOC4344181 LOC103633533 LOC100384703 LOC103834650 LOC103852268 LOC100261998 LOC7460215 LOC11423837 LOC123043844 LOC123187630 LOC123424875 LOC107900574 LOC107962091 LOC106375711 LOC106410546 CHLRE_05g234850v5 LOC110432276 LOC107062601 LOC107062608 LOC102618348 LOC100823958 LOC107830813 LOC107794752
Function* ubiquitin-specific protease 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24-like ubiquitin carboxyl-terminal hydrolase 24-like ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 10 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24-like ubiquitin carboxyl-terminal hydrolase 24 uncharacterized protein ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 2-like ubiquitin carboxyl-terminal hydrolase 24-like ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24 ubiquitin carboxyl-terminal hydrolase 24-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03013 Nucleocytoplasmic transport 3
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04070 Phosphatidylinositol signaling system 2
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
mtr03018 RNA degradation 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 2
tae00240 Pyrimidine metabolism 2
tae00250 Alanine, aspartate and glutamate metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00220 Arginine biosynthesis 2
tae00240 Pyrimidine metabolism 2
tae00250 Alanine, aspartate and glutamate metabolism 2
tae01240 Biosynthesis of cofactors 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829213 100816791 100799656 101257506 101266480 4344181 103633533 100384703 103834650 103852268 100261998 7460215 11423837 123043844 123187630 123424875 107900574 107962091 106375711 106410546 5726233 110432276 107062601 107062608 102618348 100823958 107830813 107794752
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