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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799721   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 gma-r.7   100799721   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 gma-m.5   100799721   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 gma-u.5   100791076   uncharacterized LOC100791076 
 mtr-u.5   25499634   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 ppo-u.5   7478886   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 ath-u.5   CRB   chloroplast RNA binding protein 
 vvi-u.5   100261308   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 sly-u.5   101253094   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 osa-u.5   4352083   chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 
 zma-u.5   100193292   uncharacterized LOC100193292 

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Top 50 coexpressed genes to 100799721 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799721 (gma-u.5 coexpression data)

CoexMap"100799721"


gmaLOC100799721 | Entrez gene ID : 100799721      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0033499 [list] [network] galactose catabolic process via UDP-galactose, Leloir pathway  (28 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO MF
GO:0003978 [list] [network] UDP-glucose 4-epimerase activity  (17 genes)  IEA  
Protein XP_003554610.1 [sequence] [blastp]
XP_006604786.1 [sequence] [blastp]
XP_040868662.1 [sequence] [blastp]
XP_040868663.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  vacu 1  (predict for XP_003554610.1)
chlo 7,  nucl 1,  vacu 1  (predict for XP_006604786.1)
chlo 8,  nucl 1,  mito 1,  vacu 1  (predict for XP_040868662.1)
chlo 7,  mito 1,  nucl 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for XP_040868663.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_003554610.1)
mito 2  (predict for XP_006604786.1)
mito 2  (predict for XP_040868662.1)
mito 2  (predict for XP_040868663.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799721

.
gma-r.7
for
100799721

.
gma-m.5
for
100799721

.
gma-u.5
for
100791076

.
mtr-u.5
for
25499634

.
ppo-u.5
for
7478886

.
ath-u.5
for
CRB

.
vvi-u.5
for
100261308

.
sly-u.5
for
101253094

.
osa-u.5
for
4352083

.
zma-u.5
for
100193292

.


Ortholog ID: 8225
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol CRB LOC100791076 LOC100799721 LOC101253094 LOC4352083 LOC100193292 LOC103871660 LOC100261308 LOC7478886 LOC25499634 LOC123110281 LOC123102148 LOC123425876 LOC123425623 LOC107886441 LOC107927243 LOC106346279 LOC106415409 CHLRE_10g435800v5 LOC8084746 LOC102598488 LOC102608586 LOC100821428 LOC107782473 LOC107779937
Function* chloroplast RNA binding protein uncharacterized LOC100791076 chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic uncharacterized LOC100193292 chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-like chloroplast stem-loop binding protein of 41 kDa b, chloroplastic-like chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic uncharacterized protein chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic chloroplast stem-loop binding protein of 41 kDa b, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 11
ath00710 Carbon fixation by Calvin cycle 7
ath00630 Glyoxylate and dicarboxylate metabolism 6
ath00260 Glycine, serine and threonine metabolism 3
ath00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 9
gma01200 Carbon metabolism 9
gma00195 Photosynthesis 4
gma00030 Pentose phosphate pathway 4
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 10
gma00710 Carbon fixation by Calvin cycle 8
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 5
sly00710 Carbon fixation by Calvin cycle 4
sly00195 Photosynthesis 3
sly00010 Glycolysis / Gluconeogenesis 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 9
osa00710 Carbon fixation by Calvin cycle 8
osa00630 Glyoxylate and dicarboxylate metabolism 3
osa00195 Photosynthesis 2
osa00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00710 Carbon fixation by Calvin cycle 5
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00630 Glyoxylate and dicarboxylate metabolism 5
bra00710 Carbon fixation by Calvin cycle 3
bra00260 Glycine, serine and threonine metabolism 3
bra00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 4
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 10
mtr00710 Carbon fixation by Calvin cycle 8
mtr00630 Glyoxylate and dicarboxylate metabolism 5
mtr00010 Glycolysis / Gluconeogenesis 3
mtr00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 6
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae00910 Nitrogen metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 7
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
hvu00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00710 Carbon fixation by Calvin cycle 4
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 6
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00710 Carbon fixation by Calvin cycle 4
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00710 Carbon fixation by Calvin cycle 6
bna01200 Carbon metabolism 6
bna00630 Glyoxylate and dicarboxylate metabolism 4
bna00910 Nitrogen metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 7
bna00710 Carbon fixation by Calvin cycle 5
bna00260 Glycine, serine and threonine metabolism 2
bna00270 Cysteine and methionine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 4
cre00710 Carbon fixation by Calvin cycle 3
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00061 Fatty acid biosynthesis 2
cre01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 6
sot00710 Carbon fixation by Calvin cycle 4
sot00630 Glyoxylate and dicarboxylate metabolism 4
sot00195 Photosynthesis 3
sot00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 6
cit00630 Glyoxylate and dicarboxylate metabolism 4
cit00710 Carbon fixation by Calvin cycle 3
cit00260 Glycine, serine and threonine metabolism 2
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00630 Glyoxylate and dicarboxylate metabolism 4
bdi01230 Biosynthesis of amino acids 3
bdi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837455 100791076 100799721 101253094 4352083 100193292 103871660 100261308 7478886 25499634 123110281 123102148 123425876 123425623 107886441 107927243 106346279 106415409 5715993 8084746 102598488 102608586 100821428 107782473 107779937
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