Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799837   DNA topoisomerase 1 beta 
 gma-r.7   100799837   DNA topoisomerase 1 beta 
 gma-u.5   100779575   DNA topoisomerase 1 beta 
 mtr-u.5   25480542   DNA topoisomerase 1 alpha 
 mtr-u.5   25482881   DNA topoisomerase 1 alpha 
 ppo-u.5   7483644   DNA topoisomerase 1 alpha 
 ppo-u.5   7470821   DNA topoisomerase 1 beta 
 ath-u.5   TOP1ALPHA   DNA topoisomerase I alpha 
 ath-u.5   TOP1BETA   DNA topoisomerase 1 beta 
 vvi-u.5   100244754   DNA topoisomerase 1 alpha 
 vvi-u.5   100246144   DNA topoisomerase 1 alpha 
 sly-u.5   101261043   DNA topoisomerase 1 alpha 
 osa-u.5   4344685   DNA topoisomerase 1 beta 
 zma-u.5   100191474   topoisomerase I 

close


Top 50 coexpressed genes to 100799837 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100799837 (gma-u.5 coexpression data)

CoexMap"100799837"


gmaLOC100799837 | Entrez gene ID : 100799837      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 2 2 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006265 [list] [network] DNA topological change  (14 genes)  IEA  
GO:0007059 [list] [network] chromosome segregation  (152 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (274 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (353 genes)  IEA  
GO:0005694 [list] [network] chromosome  (677 genes)  IEA  
GO MF
GO:0003917 [list] [network] DNA topoisomerase type I (single strand cut, ATP-independent) activity  (6 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_014617817.1 [sequence] [blastp]
XP_014617818.1 [sequence] [blastp]
XP_014617819.1 [sequence] [blastp]
XP_014617820.1 [sequence] [blastp]
XP_014617821.1 [sequence] [blastp]
XP_025979624.1 [sequence] [blastp]
XP_025979625.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_014617817.1)
nucl 9  (predict for XP_014617818.1)
nucl 9  (predict for XP_014617819.1)
nucl 9  (predict for XP_014617820.1)
nucl 9  (predict for XP_014617821.1)
nucl 9  (predict for XP_025979624.1)
chlo 6,  cyto 3,  mito 1,  pero 1  (predict for XP_025979625.1)
Subcellular
localization
TargetP
other 9  (predict for XP_014617817.1)
other 9  (predict for XP_014617818.1)
other 9  (predict for XP_014617819.1)
other 9  (predict for XP_014617820.1)
other 9  (predict for XP_014617821.1)
other 9  (predict for XP_025979624.1)
mito 5,  other 4  (predict for XP_025979625.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799837

.
gma-r.7
for
100799837

.
gma-u.5
for
100779575

.
mtr-u.5
for
25480542

.
mtr-u.5
for
25482881

.
ppo-u.5
for
7483644

.
ppo-u.5
for
7470821

.
ath-u.5
for
TOP1ALPHA

.
ath-u.5
for
TOP1BETA

.
vvi-u.5
for
100244754

.
vvi-u.5
for
100246144

.
sly-u.5
for
101261043

.
osa-u.5
for
4344685

.
zma-u.5
for
100191474

.


Ortholog ID: 4632
Species ath ath gma gma sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna cre sbi sot cit bdi bdi nta nta
Symbol TOP1ALPHA TOP1BETA LOC100779575 LOC100799837 LOC101261043 LOC4344685 LOC100191474 LOC103844971 LOC103851889 LOC100244754 LOC100246144 LOC7470821 LOC7483644 LOC25480542 LOC25482881 LOC123167539 LOC123410275 LOC121209369 LOC107932759 LOC106429991 CHLRE_03g178600v5 LOC8076589 LOC102586125 LOC102630648 LOC100822289 LOC100844188 LOC107801727 LOC107830452
Function* DNA topoisomerase I alpha DNA topoisomerase 1 beta DNA topoisomerase 1 beta DNA topoisomerase 1 beta DNA topoisomerase 1 alpha DNA topoisomerase 1 beta topoisomerase I DNA topoisomerase 1 beta DNA topoisomerase 1 alpha DNA topoisomerase 1 alpha DNA topoisomerase 1 alpha DNA topoisomerase 1 beta DNA topoisomerase 1 alpha DNA topoisomerase 1 alpha DNA topoisomerase 1 alpha DNA topoisomerase 1 beta DNA topoisomerase 1 beta-like DNA topoisomerase 1 beta DNA topoisomerase 1 alpha DNA topoisomerase 1 beta uncharacterized protein DNA topoisomerase 1 beta DNA topoisomerase 1-like DNA topoisomerase 1 beta-like DNA topoisomerase 1 beta DNA topoisomerase 1 beta DNA topoisomerase 1-like DNA topoisomerase 1 alpha
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03022 Basal transcription factors 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00511 Other glycan degradation 3
ghi00600 Sphingolipid metabolism 3
ghi04382 Cornified envelope formation 3
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 3
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
bdi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta04712 Circadian rhythm - plant 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 3
nta03018 RNA degradation 3
nta00790 Folate biosynthesis 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835623 835624 100779575 100799837 101261043 4344685 100191474 103844971 103851889 100244754 100246144 7470821 7483644 25480542 25482881 123167539 123410275 121209369 107932759 106429991 5728813 8076589 102586125 102630648 100822289 100844188 107801727 107830452
The preparation time of this page was 0.1 [sec].