ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100800250	uncharacterized LOC100800250
gma-r.7	100800250	uncharacterized LOC100800250
gma-m.5	100800250	uncharacterized LOC100800250
mtr-u.5	25502583	uncharacterized LOC25502583
mtr-u.5	11431324	uncharacterized LOC11431324
ppo-u.5	18098934	uncharacterized LOC18098934
ath-u.5	AT1G54520	myelin-associated oligodendrocyte basic protein
vvi-u.5	100854337	uncharacterized LOC100854337
sly-u.5	101244036	FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic
osa-u.5	4333802	FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic
zma-u.5	103643842	uncharacterized LOC103643842
zma-u.5	100274109	uncharacterized LOC100274109

functional annotation

KEGG

GO BP

GO CC

GO:0009507 [list] [network] chloroplast

(1168 genes)

IEA

GO MF

Protein

XP_003554698.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, plas 3, mito 1, E.R. 1, nucl_plas 1, golg_plas 1, cysk_plas 1, cyto_plas 1

(predict for XP_003554698.1)

Subcellular
localization
TargetP

chlo 7, mito 3

(predict for XP_003554698.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100800250	gma-r.7 for 100800250	gma-m.5 for 100800250	mtr-u.5 for 25502583	mtr-u.5 for 11431324	ppo-u.5 for 18098934	ath-u.5 for AT1G54520	vvi-u.5 for 100854337	sly-u.5 for 101244036	osa-u.5 for 4333802	zma-u.5 for 103643842	zma-u.5 for 100274109

Ortholog ID: 8284

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100800250

uncharacterized LOC25502583

uncharacterized LOC11431324

uncharacterized LOC18098934

myelin-associated oligodendrocyte basic protein

uncharacterized LOC103867451

uncharacterized LOC100854337

uncharacterized LOC107937890

uncharacterized LOC107888772

uncharacterized LOC125579175

uncharacterized LOC111212738

uncharacterized LOC102608290

FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic

uncharacterized LOC102599811

FLUCTUATING-LIGHT-ACCLIMATION protein 1, chloroplastic

uncharacterized LOC100274109

uncharacterized LOC103643842

uncharacterized LOC123090764

uncharacterized LOC123087190

uncharacterized LOC123447265

uncharacterized LOC8054130

uncharacterized LOC100843817

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	4
cit00630	Glyoxylate and dicarboxylate metabolism	3
cit04016	MAPK signaling pathway - plant	2
cit00260	Glycine, serine and threonine metabolism	2
cit00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	6
sly00710	Carbon fixation by Calvin cycle	4
sly00630	Glyoxylate and dicarboxylate metabolism	4
sly01230	Biosynthesis of amino acids	3
sly00260	Glycine, serine and threonine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00195	Photosynthesis	2
nta03015	mRNA surveillance pathway	2
nta04136	Autophagy - other	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2
nta04136	Autophagy - other	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	2
cre01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100800250

25502583

11431324

18098934

841894

103867451

100854337

107937890

107888772

125579175

111212738

102608290

101244036

102599811

107792708

107768484

4333802

100274109

103643842

123090764

123087190

123447265

8054130

100843817

5727676

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100800250 (gma-u.5 coexpression data)

Top 50 enrichment test to 100800250 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	2	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100800250 (gma-u.5 coexpression data)

Top 50 enrichment test to 100800250 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**