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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   LBD16   LBD domain-containing transcription factor 
 gma-r.7   LBD16   LBD domain-containing transcription factor 
 gma-u.5   LBD23   LBD domain-containing transcription factor 
 gma-u.5   100802764   LOB domain-containing protein 38 
 mtr-u.5   11407764   LOB domain-containing protein 38 
 mtr-u.5   11421111   LOB domain-containing protein 39 
 mtr-u.5   11415147   LOB domain-containing protein 38 
 ppo-u.5   7469628   LOB domain-containing protein 39 
 ppo-u.5   7488873   LOB domain-containing protein 39 
 ath-u.5   LBD38   LOB domain-containing protein 38 
 ath-u.5   LBD39   LOB domain-containing protein 39 
 ath-u.5   LBD37   LOB domain-containing protein 37 
 bra-r.6   103862548   LOB domain-containing protein 39 
 bra-r.6   103840914   LOB domain-containing protein 38 
 bra-r.6   103859023   LOB domain-containing protein 39 
 vvi-u.5   100265159   LOB domain-containing protein 38 
 vvi-u.5   100255841   LOB domain-containing protein 38 
 vvi-u.5   100261250   LOB domain-containing protein 38 
 ghi-r.1   107899435   LOB domain-containing protein 38 
 ghi-r.1   107908849   LOB domain-containing protein 38 
 ghi-r.1   107913273   LOB domain-containing protein 38 
 bna-r.1   125592971   LOB domain-containing protein 39-like 
 bna-r.1   106407443   LOB domain-containing protein 38-like 
 bna-r.1   106405874   LOB domain-containing protein 37-like 
 cit-r.1   102609800   LOB domain-containing protein 38 
 cit-r.1   102610110   LOB domain-containing protein 38-like 
 cit-r.1   102621360   LOB domain-containing protein 39 
 sly-u.5   101258116   LOB domain-containing protein 37 
 sly-u.5   101268035   LOB domain-containing protein 37 
 sly-u.5   101261022   LOB domain-containing protein 38-like 
 sot-r.1   102601447   LOB domain-containing protein 38-like 
 sot-r.1   102590299   LOB domain-containing protein 37-like 
 sot-r.1   102592166   LOB domain-containing protein 37 
 nta-r.1   107803004   LOB domain-containing protein 37 
 nta-r.1   107798610   LOB domain-containing protein 37-like 
 nta-r.1   107798325   LOB domain-containing protein 37 
 osa-u.5   4333227   LOB domain-containing protein 37 
 osa-u.5   4333430   LOB domain-containing protein 38 
 zma-u.5   103643744   LOB domain-containing protein 37 
 tae-r.2   123044360   LOB domain-containing protein 37 
 tae-r.2   123052233   LOB domain-containing protein 37 
 tae-r.2   123086842   LOB domain-containing protein 39 
 hvu-r.1   123451142   LOB domain-containing protein 37-like 
 hvu-r.1   123425484   LOB domain-containing protein 37-like 
 sbi-r.1   8064504   LOB domain-containing protein 38 
 sbi-r.1   8078982   LOB domain-containing protein 37 
 sbi-r.1   8063213   LOB domain-containing protein 37 
 bdi-r.1   100832110   LOB domain-containing protein 37 
 bdi-r.1   100829268   LOB domain-containing protein 37 

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Top 50 coexpressed genes to LBD16 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LBD16 (gma-u.5 coexpression data)

CoexMap"100800624"


gmaLBD16 | Entrez gene ID : 100800624      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 3 3 3 3 3 3 3 3 2 1 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010468 [list] [network] regulation of gene expression  (3741 genes)  IEA  
GO CC
GO MF
Protein NP_001340895.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for NP_001340895.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001340895.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
LBD16
gma-r.7
for
LBD16
gma-u.5
for
LBD23
gma-u.5
for
100802764
mtr-u.5
for
11407764
mtr-u.5
for
11421111
mtr-u.5
for
11415147
ppo-u.5
for
7469628
ppo-u.5
for
7488873
ath-u.5
for
LBD38
ath-u.5
for
LBD39
ath-u.5
for
LBD37
bra-r.6
for
103862548
bra-r.6
for
103840914
bra-r.6
for
103859023
vvi-u.5
for
100265159
vvi-u.5
for
100255841
vvi-u.5
for
100261250
ghi-r.1
for
107899435
ghi-r.1
for
107908849
ghi-r.1
for
107913273
bna-r.1
for
125592971
bna-r.1
for
106407443
bna-r.1
for
106405874
cit-r.1
for
102609800
cit-r.1
for
102610110
cit-r.1
for
102621360
sly-u.5
for
101258116
sly-u.5
for
101268035
sly-u.5
for
101261022
sot-r.1
for
102601447
sot-r.1
for
102590299
sot-r.1
for
102592166
nta-r.1
for
107803004
nta-r.1
for
107798610
nta-r.1
for
107798325
osa-u.5
for
4333227
osa-u.5
for
4333430
zma-u.5
for
103643744
tae-r.2
for
123044360
tae-r.2
for
123052233
tae-r.2
for
123086842
hvu-r.1
for
123451142
hvu-r.1
for
123425484
sbi-r.1
for
8064504
sbi-r.1
for
8078982
sbi-r.1
for
8063213
bdi-r.1
for
100832110
bdi-r.1
for
100829268


Ortholog ID: 1059
Species gma gma gma mtr mtr mtr ppo ppo ath ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LBD23 LBD5 LOC100796966 LOC11407764 LOC11421111 LOC11415147 LOC7469628 LOC7488873 LBD38 LBD39 LBD37 LOC103862548 LOC103859023 LOC103829504 LOC100265159 LOC100255841 LOC100261250 LOC107899435 LOC107941889 LOC121217810 LOC106407443 LOC106444813 LOC106444302 LOC102609800 LOC102610110 LOC102621360 LOC101258116 LOC101268035 LOC101261022 LOC102601447 LOC102590299 LOC102592166 LOC107798610 LOC107798325 LOC107818067 LOC4333227 LOC4333430 LOC103643744 LOC123044360 LOC123091131 LOC123096135 LOC123451142 LOC123425484 LOC8064504 LOC8078982 LOC8063213 LOC100832110 LOC100829268
Function* LBD domain-containing transcription factor LBD domain-containing transcription factor LOB domain-containing protein 39 LOB domain-containing protein 38 LOB domain-containing protein 39 LOB domain-containing protein 38 LOB domain-containing protein 39 LOB domain-containing protein 39 LOB domain-containing protein 38 LOB domain-containing protein 39 LOB domain-containing protein 37 LOB domain-containing protein 39 LOB domain-containing protein 39 LOB domain-containing protein 37 LOB domain-containing protein 38 LOB domain-containing protein 38 LOB domain-containing protein 38 LOB domain-containing protein 38 LOB domain-containing protein 38 LOB domain-containing protein 38 LOB domain-containing protein 38-like LOB domain-containing protein 37-like LOB domain-containing protein 38-like LOB domain-containing protein 38 LOB domain-containing protein 38-like LOB domain-containing protein 39 LOB domain-containing protein 37 LOB domain-containing protein 37 LOB domain-containing protein 38-like LOB domain-containing protein 38-like LOB domain-containing protein 37-like LOB domain-containing protein 37 LOB domain-containing protein 37-like LOB domain-containing protein 37 LOB domain-containing protein 37-like LOB domain-containing protein 37 LOB domain-containing protein 38 LOB domain-containing protein 37 LOB domain-containing protein 37 LOB domain-containing protein 39 LOB domain-containing protein 39 LOB domain-containing protein 37-like LOB domain-containing protein 37-like LOB domain-containing protein 38 LOB domain-containing protein 37 LOB domain-containing protein 37 LOB domain-containing protein 37 LOB domain-containing protein 37
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00220 Arginine biosynthesis 2
mtr00250 Alanine, aspartate and glutamate metabolism 2
mtr00910 Nitrogen metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 3
mtr01240 Biosynthesis of cofactors 3
mtr01200 Carbon metabolism 3
mtr00910 Nitrogen metabolism 3
mtr01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00910 Nitrogen metabolism 2
ppo01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 3
ppo00270 Cysteine and methionine metabolism 2
ppo04981 Folate transport and metabolism 2
ppo00220 Arginine biosynthesis 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 7
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 5
cit04075 Plant hormone signal transduction 4
cit00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 3
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 4
osa01310 Nitrogen cycle 4
osa00195 Photosynthesis 2
osa00030 Pentose phosphate pathway 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00910 Nitrogen metabolism 4
zma01240 Biosynthesis of cofactors 3
zma01310 Nitrogen cycle 3
zma00860 Porphyrin metabolism 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00910 Nitrogen metabolism 3
tae01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00620 Pyruvate metabolism 3
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00910 Nitrogen metabolism 3
tae01310 Nitrogen cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00910 Nitrogen metabolism 3
bdi01310 Nitrogen cycle 3
bdi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100816480 100816189 100796966 11407764 11421111 11415147 7469628 7488873 824156 829909 836878 103862548 103859023 103829504 100265159 100255841 100261250 107899435 107941889 121217810 106407443 106444813 106444302 102609800 102610110 102621360 101258116 101268035 101261022 102601447 102590299 102592166 107798610 107798325 107818067 4333227 4333430 103643744 123044360 123091131 123096135 123451142 123425484 8064504 8078982 8063213 100832110 100829268
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