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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100801994   pentatricopeptide repeat-containing protein At4g20090 
 gma-r.7   100801994   pentatricopeptide repeat-containing protein At4g20090 
 mtr-u.5   11444332   pentatricopeptide repeat-containing protein At4g20090 
 ppo-u.5   7491468   pentatricopeptide repeat-containing protein At4g20090 
 ppo-u.5   7465363   pentatricopeptide repeat-containing protein At4g20090 
 ath-u.5   EMB1025   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100249022   pentatricopeptide repeat-containing protein At4g20090 
 sly-u.5   101253553   pentatricopeptide repeat-containing protein At4g20090 
 osa-u.5   9268066   pentatricopeptide repeat-containing protein At4g20090 
 zma-u.5   118476028   uncharacterized LOC118476028 

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Top 50 coexpressed genes to 100801994 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100801994 (gma-u.5 coexpression data)

CoexMap"100801994"


gmaLOC100801994 | Entrez gene ID : 100801994      
Species gma mtr ppo ath vvi sly osa zma sot hvu tae cit sbi ghi cre bna nta bdi bra
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006586943.1 [sequence] [blastp]
XP_006586944.1 [sequence] [blastp]
XP_006586946.1 [sequence] [blastp]
XP_040861301.1 [sequence] [blastp]
XP_040861302.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 1,  cyto_mito 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_006586943.1)
chlo 7,  mito 1,  cyto_mito 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_006586944.1)
chlo 7,  mito 1,  cyto_mito 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_006586946.1)
chlo 7,  mito 1,  cyto_mito 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_040861301.1)
chlo 7,  mito 1,  cyto_mito 1,  cyto 1,  pero 1,  cyto_pero 1  (predict for XP_040861302.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_006586943.1)
mito 4  (predict for XP_006586944.1)
mito 4  (predict for XP_006586946.1)
mito 4  (predict for XP_040861301.1)
mito 4  (predict for XP_040861302.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100801994

.
gma-r.7
for
100801994

.
mtr-u.5
for
11444332

.
ppo-u.5
for
7491468

.
ppo-u.5
for
7465363

.
ath-u.5
for
EMB1025

.
vvi-u.5
for
100249022

.
sly-u.5
for
101253553

.
osa-u.5
for
9268066

.
zma-u.5
for
118476028

.


Ortholog ID: 11710
Species ath gma sly osa zma bra vvi ppo ppo mtr tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol EMB1025 LOC100801994 LOC101253553 LOC9268066 LOC118476028 LOC103857964 LOC100249022 LOC7491468 LOC7465363 LOC11444332 LOC123168566 LOC123411413 LOC107914093 LOC107957685 LOC106438057 LOC106365937 LOC8060853 LOC102595408 LOC102608678 LOC100840200 LOC107775862 LOC107800787
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 uncharacterized LOC118476028 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090-like pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 pentatricopeptide repeat-containing protein At4g20090 uncharacterized LOC107775862 uncharacterized LOC107800787
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00052 Galactose metabolism 2
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
nta00770 Pantothenate and CoA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827754 100801994 101253553 9268066 118476028 103857964 100249022 7491468 7465363 11444332 123168566 123411413 107914093 107957685 106438057 106365937 8060853 102595408 102608678 100840200 107775862 107800787
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