ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100802762	phosphatase YqaB-like
gma-r.7	100802762	phosphatase YqaB-like
gma-m.5	100802762	phosphatase YqaB-like
gma-u.5	100793483	phosphatase YqaB-like
gma-u.5	100805421	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
mtr-u.5	11439431	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ppo-u.5	18094216	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ppo-u.5	18105027	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
ath-u.5	AT2G38740	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
vvi-u.5	100252262	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
vvi-u.5	100247838	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sly-u.5	101258396	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
sly-u.5	101245863	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
osa-u.5	4349443	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
osa-u.5	112935984	haloacid dehalogenase-like hydrolase domain-containing protein Sgpp
zma-u.5	100282116	uncharacterized LOC100282116
zma-u.5	100501636	uncharacterized LOC100501636

Top 50 coexpressed genes to 100802762 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100802762 (gma-u.5 coexpression data)

CoexMap"100802762"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001242699.2 [sequence] [blastp]
XP_006590329.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, vacu 3, E.R. 1, cyto_nucl 1, nucl 1, cyto 1	(predict for NP_001242699.2)
chlo 5, vacu 1, E.R. 1, E.R._vacu 1, nucl 1, cyto_nucl 1	(predict for XP_006590329.1)

Subcellular
localization
TargetP

other 5, scret 3	(predict for NP_001242699.2)
other 5, scret 3	(predict for XP_006590329.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100802762	gma-r.7 for 100802762	gma-m.5 for 100802762	gma-u.5 for 100793483	gma-u.5 for 100805421	mtr-u.5 for 11439431	ppo-u.5 for 18094216	ppo-u.5 for 18105027	ath-u.5 for AT2G38740	vvi-u.5 for 100252262	vvi-u.5 for 100247838	sly-u.5 for 101258396	sly-u.5 for 101245863	osa-u.5 for 4349443	osa-u.5 for 112935984	zma-u.5 for 100282116	zma-u.5 for 100501636

Ortholog

Ortholog ID: 3091

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

phosphatase YqaB-like

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

Haloacid dehalogenase-like hydrolase (HAD) superfamily protein

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

uncharacterized LOC100282116

uncharacterized LOC100501636

haloacid dehalogenase-like hydrolase domain-containing protein Sgpp

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2
gma00053	Ascorbate and aldarate metabolism	2
gma00071	Fatty acid degradation	2
gma00280	Valine, leucine and isoleucine degradation	2
gma00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01240	Biosynthesis of cofactors	5
gma00564	Glycerophospholipid metabolism	3
gma00740	Riboflavin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00190	Oxidative phosphorylation	6
mtr01240	Biosynthesis of cofactors	2
mtr03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	4
ppo01200	Carbon metabolism	4
ppo01230	Biosynthesis of amino acids	4
ppo00564	Glycerophospholipid metabolism	2
ppo00710	Carbon fixation by Calvin cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00740	Riboflavin metabolism	2
ath04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2
cit04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01240	Biosynthesis of cofactors	5
sly00020	Citrate cycle (TCA cycle)	3
sly00620	Pyruvate metabolism	3
sly01200	Carbon metabolism	3
sly00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	4
sot00750	Vitamin B6 metabolism	2
sot00053	Ascorbate and aldarate metabolism	2
sot00562	Inositol phosphate metabolism	2
sot04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta01200	Carbon metabolism	3
nta00020	Citrate cycle (TCA cycle)	2
nta00310	Lysine degradation	2
nta00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00920	Sulfur metabolism	2
osa01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	9
osa00010	Glycolysis / Gluconeogenesis	8
osa00620	Pyruvate metabolism	6
osa01230	Biosynthesis of amino acids	5
osa00052	Galactose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	6
tae00061	Fatty acid biosynthesis	3
tae00071	Fatty acid degradation	3
tae01212	Fatty acid metabolism	3
tae04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	6
tae00260	Glycine, serine and threonine metabolism	5
tae01230	Biosynthesis of amino acids	5
tae00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01240	Biosynthesis of cofactors	2
sbi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00230	Purine metabolism	2
sbi01200	Carbon metabolism	2
sbi00520	Amino sugar and nucleotide sugar metabolism	2
sbi01250	Biosynthesis of nucleotide sugars	2
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100805421

100793483

11439431

18096924

18094216

818456

103865684

103857810

100247838

107886386

107943055

106447684

106410648

102618265

101258396

102596724

102599074

107781930

107823693

4349443

112935984

100282116

100501636

123167532

123088445

123411568

123426748

8055620

8066886

100838401

100831053

5717124

The preparation time of this page was 0.1 [sec].


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	5	1	2	1	2	2	2	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100802762 (gma-u.5 coexpression data)

Top 50 enrichment test to 100802762 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**