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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100802863   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 gma-r.7   100802863   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 gma-u.5   100802336   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 gma-u.5   100786582   ATP-dependent Clp protease ATP-binding subunit-like 
 gma-u.5   100786069   ATP-dependent Clp protease ATP-binding subunit CLPT1-like 
 mtr-u.5   25497132   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 mtr-u.5   11439530   ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic 
 ppo-u.5   7476767   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 ppo-u.5   7482176   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 ppo-u.5   7490941   ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic 
 ath-u.5   AT4G12060   Double Clp-N motif protein 
 ath-u.5   AT4G25370   Double Clp-N motif protein 
 vvi-u.5   100261804   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 sly-u.5   101260161   ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic 
 sly-u.5   101246403   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 osa-u.5   4332243   ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic 
 zma-u.5   100281862   ATP-dependent Clp protease ATP-binding subunit clpA 
 zma-u.5   100274511   uncharacterized LOC100274511 

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Top 50 coexpressed genes to 100802863 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100802863 (gma-u.5 coexpression data)

CoexMap"100802863"


gmaLOC100802863 | Entrez gene ID : 100802863    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 2 3 2 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_003534041.3 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003534041.3)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003534041.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100802863

.
gma-r.7
for
100802863

.
gma-u.5
for
100802336

.
gma-u.5
for
100786582

.
gma-u.5
for
100786069

.
mtr-u.5
for
25497132

.
mtr-u.5
for
11439530

.
ppo-u.5
for
7476767

.
ppo-u.5
for
7482176

.
ppo-u.5
for
7490941

.
ath-u.5
for
AT4G12060

.
ath-u.5
for
AT4G25370

.
vvi-u.5
for
100261804

.
sly-u.5
for
101260161

.
sly-u.5
for
101246403

.
osa-u.5
for
4332243

.
zma-u.5
for
100281862

.
zma-u.5
for
100274511

.


Ortholog ID: 4588
Species ath ath gma gma sly sly osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT4G12060 AT4G25370 LOC100802336 LOC100802863 LOC101260161 LOC101246403 LOC4332243 LOC100281862 LOC100274511 LOC103861553 LOC103839907 LOC100261804 LOC7476767 LOC7482176 LOC25497132 LOC11439530 LOC123092770 LOC123098065 LOC123449159 LOC107963657 LOC107892044 LOC106367030 LOC106440835 LOC8078852 LOC102603355 LOC102605408 LOC102623890 LOC102614445 LOC100844920 LOC107780626 LOC107809674
Function* Double Clp-N motif protein Double Clp-N motif protein ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit clpA uncharacterized LOC100274511 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic-like ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic-like ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 2
vvi03018 RNA degradation 2
vvi00920 Sulfur metabolism 2
vvi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae00860 Porphyrin metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 6
tae01240 Biosynthesis of cofactors 6
tae00520 Amino sugar and nucleotide sugar metabolism 2
tae00561 Glycerolipid metabolism 2
tae00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01240 Biosynthesis of cofactors 6
ghi00220 Arginine biosynthesis 4
ghi00250 Alanine, aspartate and glutamate metabolism 4
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00860 Porphyrin metabolism 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826814 828640 100802336 100802863 101260161 101246403 4332243 100281862 100274511 103861553 103839907 100261804 7476767 7482176 25497132 11439530 123092770 123098065 123449159 107963657 107892044 106367030 106440835 8078852 102603355 102605408 102623890 102614445 100844920 107780626 107809674
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