Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   SRT4   NAD-dependent protein deacetylase SRT1-like 
 gma-r.7   SRT4   NAD-dependent protein deacetylase SRT1-like 
 gma-u.5   100784468   NAD-dependent protein deacetylase SRT1 
 mtr-u.5   25490726   NAD-dependent protein deacetylase SRT1 
 ppo-u.5   7485113   NAD-dependent protein deacetylase SRT1 
 ath-u.5   SRT1   sirtuin 1 
 vvi-u.5   100261752   NAD-dependent protein deacetylase SRT1 
 sly-u.5   101251202   NAD-dependent protein deacetylase SRT1 
 osa-u.5   4335342   NAD-dependent protein deacetylase SRT1-like 
 zma-u.5   542568   NAD-dependent protein deacetylase SRT1 

close


Top 50 coexpressed genes to SRT4 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to SRT4 (gma-u.5 coexpression data)

CoexMap"100803586"


gmaSRT4 | Entrez gene ID : 100803586      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00760 [list] [network] Nicotinate and nicotinamide metabolism (51 genes)
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (35 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0070403 [list] [network] NAD+ binding  (30 genes)  IEA  
GO:0003714 [list] [network] transcription corepressor activity  (50 genes)  IEA  
Protein XP_003551434.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  cysk 2,  nucl_plas 2  (predict for XP_003551434.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003551434.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
SRT4

.
gma-r.7
for
SRT4

.
gma-u.5
for
100784468

.
mtr-u.5
for
25490726

.
ppo-u.5
for
7485113

.
ath-u.5
for
SRT1

.
vvi-u.5
for
100261752

.
sly-u.5
for
101251202

.
osa-u.5
for
4335342

.
zma-u.5
for
542568

.


Ortholog ID: 9737
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit cit bdi nta nta
Symbol SRT1 SRT4 LOC100784468 LOC101251202 LOC4335342 LOC542568 LOC103856967 LOC100261752 LOC7485113 LOC25490726 LOC123051334 LOC780625 LOC123424570 LOC121212471 LOC107920273 LOC111212707 LOC106387403 CHLRE_10g462200v5 LOC110436344 LOC102582619 LOC102607534 LOC102614014 LOC100826316 LOC107810053 LOC107809205
Function* sirtuin 1 NAD-dependent protein deacetylase SRT1-like NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1-like NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1-like NAD-dependent protein deacetylase SRT1 uncharacterized protein NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1-like NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1 NAD-dependent protein deacetylase SRT1-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 7
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
bra03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00760 Nicotinate and nicotinamide metabolism 3
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae00760 Nicotinate and nicotinamide metabolism 3
tae00450 Selenocompound metabolism 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03250 Viral life cycle - HIV-1 2
bna00760 Nicotinate and nicotinamide metabolism 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03250 Viral life cycle - HIV-1 2
bna00760 Nicotinate and nicotinamide metabolism 2
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi00760 Nicotinate and nicotinamide metabolism 2
sbi00061 Fatty acid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835670 100803586 100784468 101251202 4335342 542568 103856967 100261752 7485113 25490726 123051334 780625 123424570 121212471 107920273 111212707 106387403 5724160 110436344 102582619 102607534 102614014 100826316 107810053 107809205
The preparation time of this page was 0.1 [sec].