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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100804035   chaperone protein ClpC, chloroplastic 
 gma-r.7   100804035   chaperone protein ClpC, chloroplastic 
 gma-u.5   100800786   chaperone protein ClpD, chloroplastic 
 gma-u.5   100801296   chaperone protein ClpB3, chloroplastic 
 gma-u.5   100816840   chaperone protein ClpB3, chloroplastic 
 mtr-u.5   25493878   chaperone protein ClpB1 
 mtr-u.5   25491143   chaperone protein ClpC, chloroplastic 
 mtr-u.5   25489942   chaperone protein ClpC, chloroplastic 
 ppo-u.5   7484562   chaperone protein ClpB3, chloroplastic 
 ppo-u.5   7484908   chaperone protein ClpD, chloroplastic 
 ppo-u.5   7456671   chaperone protein ClpD, chloroplastic 
 ath-u.5   HSP101   heat shock protein 101 
 ath-u.5   ERD1   Clp ATPase 
 ath-u.5   CLPC1   CLPC homologue 1 
 vvi-u.5   100252611   chaperone protein ClpB3, chloroplastic 
 vvi-u.5   100250896   ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic 
 vvi-u.5   100247399   chaperone protein ClpB4, mitochondrial 
 sly-u.5   101248184   chaperone protein ClpD, chloroplastic 
 sly-u.5   101248395   chaperone protein ClpB4, mitochondrial 
 sly-u.5   CD4B   ATP-dependent protease 
 osa-u.5   4335702   chaperone protein ClpC1, chloroplastic-like 
 osa-u.5   4328515   chaperone protein ClpB3, mitochondrial-like 
 osa-u.5   4329520   chaperone protein ClpD1, chloroplastic-like 
 zma-u.5   100193235   uncharacterized LOC100193235 
 zma-u.5   100217072   Chaperone protein ClpB4 mitochondrial 
 zma-u.5   100383416   uncharacterized LOC100383416 

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Top 50 coexpressed genes to 100804035 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100804035 (gma-u.5 coexpression data)

CoexMap"100804035"


gmaLOC100804035 | Entrez gene ID : 100804035      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034605 [list] [network] cellular response to heat  (62 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (756 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003526929.1 [sequence] [blastp]
XP_006581844.1 [sequence] [blastp]
XP_040872485.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  vacu 1  (predict for XP_003526929.1)
chlo 9,  vacu 1  (predict for XP_006581844.1)
chlo 9,  vacu 1  (predict for XP_040872485.1)
Subcellular
localization
TargetP
chlo 4,  mito 4  (predict for XP_003526929.1)
chlo 4,  mito 4  (predict for XP_006581844.1)
chlo 4,  mito 4  (predict for XP_040872485.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100804035

.
gma-r.7
for
100804035

.
gma-u.5
for
100800786

.
gma-u.5
for
100801296

.
gma-u.5
for
100816840

.
mtr-u.5
for
25493878

.
mtr-u.5
for
25491143

.
mtr-u.5
for
25489942

.
ppo-u.5
for
7484562

.
ppo-u.5
for
7484908

.
ppo-u.5
for
7456671

.
ath-u.5
for
HSP101

.
ath-u.5
for
ERD1

.
ath-u.5
for
CLPC1

.
vvi-u.5
for
100252611

.
vvi-u.5
for
100250896

.
vvi-u.5
for
100247399

.
sly-u.5
for
101248184

.
sly-u.5
for
101248395

.
sly-u.5
for
CD4B

.
osa-u.5
for
4335702

.
osa-u.5
for
4328515

.
osa-u.5
for
4329520

.
zma-u.5
for
100193235

.
zma-u.5
for
100217072

.
zma-u.5
for
100383416

.


Ortholog ID: 158
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre cre sbi sbi sot sot cit cit bdi nta nta
Symbol CLPC1 ERD1 LOC100795662 LOC100801296 hsp100/ClpB CD4A LOC4329520 LOC541780 LOC103636567 LOC103846412 LOC103857205 HSP101 LOC100250896 LOC18103824 LOC7456642 LOC11412992 LOC25489942 LOC123136534 LOC123426575 LOC107960369 LOC107931444 LOC106389772 LOC106372155 CHLRE_12g533351v5 CHLRE_10g465550v5 LOC8079407 LOC8072025 LOC102592268 LOC102584342 LOC102622978 LOC102614277 LOC100840449 LOC107804165 LOC107763527
Function* CLPC homologue 1 Clp ATPase chaperone protein ClpB3, chloroplastic chaperone protein ClpB3, chloroplastic heat shock protein ATP-dependent protease CD4A chaperone protein ClpD1, chloroplastic-like heat-shock protein 101 chaperone protein ClpB2, chloroplastic-like chaperone protein ClpB3, chloroplastic chaperone protein ClpD, chloroplastic heat shock protein 101 ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic chaperone protein ClpC, chloroplastic chaperone protein ClpC, chloroplastic chaperone protein ClpB3, chloroplastic chaperone protein ClpC, chloroplastic chaperone protein ClpB3, mitochondrial chaperone protein ClpC1, chloroplastic chaperone protein ClpB3, chloroplastic chaperone protein ClpD, chloroplastic chaperone protein ClpB4, mitochondrial chaperone protein ClpB3, chloroplastic-like uncharacterized protein uncharacterized protein chaperone protein ClpB3, mitochondrial chaperone protein ClpC1, chloroplastic chaperone protein ClpB3, chloroplastic ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic-like chaperone protein ClpB4, mitochondrial chaperone protein ClpD, chloroplastic chaperone protein ClpD1, chloroplastic ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic-like chaperone protein ClpB1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00230 Purine metabolism 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 7
gma03040 Spliceosome 3
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 4
sly03040 Spliceosome 2
sly04144 Endocytosis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 12
zma03040 Spliceosome 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma03040 Spliceosome 2
zma04144 Endocytosis 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 4
bra03250 Viral life cycle - HIV-1 2
bra03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 11
vvi03040 Spliceosome 4
vvi04144 Endocytosis 4
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 2
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu03040 Spliceosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04626 Plant-pathogen interaction 5
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 3
cre00970 Aminoacyl-tRNA biosynthesis 3
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 5
sbi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot03040 Spliceosome 3
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
cit04626 Plant-pathogen interaction 3
cit03040 Spliceosome 3
cit04144 Endocytosis 3
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 5
nta03040 Spliceosome 4
nta04144 Endocytosis 4
nta00053 Ascorbate and aldarate metabolism 2
nta00480 Glutathione metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835165 835180 100795662 100801296 778327 101265014 4329520 541780 103636567 103846412 103857205 100232966 100250896 18103824 7456642 11412992 25489942 123136534 123426575 107960369 107931444 106389772 106372155 5718536 5724186 8079407 8072025 102592268 102584342 102622978 102614277 100840449 107804165 107763527
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