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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100804236   glutamic acid-rich protein 
 gma-r.7   100804236   glutamic acid-rich protein 
 gma-m.5   100804236   glutamic acid-rich protein 
 gma-u.5   100785693   glutamic acid-rich protein 
 mtr-u.5   11443721   DNA-directed RNA polymerase III subunit RPC7-like 
 mtr-u.5   11419825   glutamic acid-rich protein 
 ppo-u.5   7483552   uncharacterized LOC7483552 
 ath-u.5   AT4G01590   DNA-directed RNA polymerase III subunit 
 ath-u.5   AT4G35685   DNA-directed RNA polymerase III subunit 
 vvi-u.5   104880228   uncharacterized LOC104880228 
 sly-u.5   101246067   uncharacterized LOC101246067 
 osa-u.5   4343875   uncharacterized LOC4343875 
 zma-u.5   100276973   uncharacterized LOC100276973 

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Top 50 coexpressed genes to 100804236 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100804236 (gma-u.5 coexpression data)

CoexMap"100804236"


gmaLOC100804236 | Entrez gene ID : 100804236      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03020 [list] [network] RNA polymerase (81 genes)
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (50 genes)  IEA  
GO CC
GO:0005666 [list] [network] RNA polymerase III complex  (45 genes)  IEA  
GO MF
Protein XP_006597459.1 [sequence] [blastp]
XP_014623587.1 [sequence] [blastp]
XP_014623588.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_006597459.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  golg 1,  chlo_mito 1,  golg_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_014623587.1)
nucl 6,  chlo 1,  cyto 1,  mito 1,  plas 1,  golg 1,  chlo_mito 1,  golg_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_014623588.1)
Subcellular
localization
TargetP
mito 8,  other 3  (predict for XP_006597459.1)
mito 8,  other 3  (predict for XP_014623587.1)
mito 8,  other 3  (predict for XP_014623588.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100804236

.
gma-r.7
for
100804236

.
gma-m.5
for
100804236

.
gma-u.5
for
100785693

.
mtr-u.5
for
11443721

.
mtr-u.5
for
11419825

.
ppo-u.5
for
7483552

.
ath-u.5
for
AT4G01590

.
ath-u.5
for
AT4G35685

.
vvi-u.5
for
104880228

.
sly-u.5
for
101246067

.
osa-u.5
for
4343875

.
zma-u.5
for
100276973

.


Ortholog ID: 6939
Species ath ath gma gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna sbi sot sot cit cit bdi nta nta
Symbol AT4G35685 AT4G01590 LOC100785693 LOC100804236 LOC101246067 LOC4343875 LOC100276973 LOC103853345 LOC104880228 LOC7483552 LOC11443721 LOC11419825 LOC123052115 LOC123185001 LOC123429701 LOC107889584 LOC107891146 LOC106434882 LOC8056553 LOC102583740 LOC102601956 LOC102610615 LOC102614475 LOC100844933 LOC107804681 LOC107816093
Function* DNA-directed RNA polymerase III subunit DNA-directed RNA polymerase III subunit glutamic acid-rich protein glutamic acid-rich protein uncharacterized LOC101246067 uncharacterized LOC4343875 uncharacterized LOC100276973 DNA-directed RNA polymerase III subunit rpc31 uncharacterized LOC104880228 uncharacterized LOC7483552 DNA-directed RNA polymerase III subunit RPC7-like glutamic acid-rich protein glutamic acid-rich protein glutamic acid-rich protein glutamic acid-rich protein-like nucleolar transcription factor 1 nucleolar transcription factor 1 DNA-directed RNA polymerase III subunit rpc31 glutamic acid-rich protein DNA-directed RNA polymerase III subunit RPC7-like glutamic acid-rich protein-like late secretory pathway protein AVL9-like uncharacterized LOC102614475 glutamic acid-rich protein uncharacterized LOC107804681 uncharacterized LOC107816093
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 4
gma03020 RNA polymerase 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03020 RNA polymerase 2
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03020 RNA polymerase 4
bra03010 Ribosome 4
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03420 Nucleotide excision repair 2
ghi03460 Fanconi anemia pathway 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01240 Biosynthesis of cofactors 2
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03022 Basal transcription factors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829720 828101 100785693 100804236 101246067 4343875 100276973 103853345 104880228 7483552 11443721 11419825 123052115 123185001 123429701 107889584 107891146 106434882 8056553 102583740 102601956 102610615 102614475 100844933 107804681 107816093
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