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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100804533   general transcription factor 3C polypeptide 3 
 gma-r.7   100804533   general transcription factor 3C polypeptide 3 
 gma-m.5   100804533   general transcription factor 3C polypeptide 3 
 gma-u.5   100813793   general transcription factor 3C polypeptide 3 
 mtr-u.5   11444918   general transcription factor 3C polypeptide 3 
 mtr-u.5   11420262   general transcription factor 3C polypeptide 3 
 ath-u.5   AT1G17680   tetratricopeptide repeat (TPR)-containing protein 
 vvi-u.5   100257006   uncharacterized LOC100257006 
 sly-u.5   101258763   uncharacterized LOC101258763 
 osa-u.5   4350254   uncharacterized LOC4350254 
 zma-u.5   103652996   general transcription factor 3C polypeptide 3 

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Top 50 coexpressed genes to 100804533 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100804533 (gma-u.5 coexpression data)

CoexMap"100804533"


gmaLOC100804533 | Entrez gene ID : 100804533      
Species gma mtr ath vvi sly osa zma ppo hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 4 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (50 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (13 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006592051.1 [sequence] [blastp]
XP_006592052.1 [sequence] [blastp]
XP_014619930.1 [sequence] [blastp]
XP_014619932.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_006592051.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_006592052.1)
cyto 4,  nucl 3,  golg 2,  cyto_E.R. 2  (predict for XP_014619930.1)
cyto 7,  nucl 2  (predict for XP_014619932.1)
Subcellular
localization
TargetP
other 8  (predict for XP_006592051.1)
other 8  (predict for XP_006592052.1)
other 8  (predict for XP_014619930.1)
other 6,  scret 4,  mito 3  (predict for XP_014619932.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100804533

.
gma-r.7
for
100804533

.
gma-m.5
for
100804533

.
gma-u.5
for
100813793

.
mtr-u.5
for
11444918

.
mtr-u.5
for
11420262

.
ath-u.5
for
AT1G17680

.
vvi-u.5
for
100257006

.
sly-u.5
for
101258763

.
osa-u.5
for
4350254

.
zma-u.5
for
103652996

.


Ortholog ID: 7038
Species ath gma gma sly osa zma bra vvi mtr mtr tae tae hvu ghi ghi bna cre cre sbi sot cit cit bdi nta nta
Symbol AT1G17680 LOC100804533 LOC100813793 LOC101258763 LOC4350254 LOC103652996 LOC103872551 LOC100257006 LOC11420262 LOC11444918 LOC123113279 LOC123122792 LOC123452182 LOC107931920 LOC107947032 LOC106427155 CHLRE_10g464950v5 CHLRE_06g268800v5 LOC8085150 LOC102594364 LOC102608664 LOC102627555 LOC100831287 LOC107760391 LOC107827214
Function* tetratricopeptide repeat (TPR)-containing protein general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 uncharacterized LOC101258763 uncharacterized LOC4350254 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 uncharacterized LOC100257006 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 uncharacterized protein uncharacterized protein general transcription factor 3C polypeptide 3 general transcription factor 3C polypeptide 3 uncharacterized LOC102608664 uncharacterized LOC102627555 general transcription factor 3C polypeptide 3 uncharacterized LOC107760391 uncharacterized LOC107827214
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 2
gma04142 Lysosome 2
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 4
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
ghi00531 Glycosaminoglycan degradation 2
ghi00600 Sphingolipid metabolism 2
ghi00604 Glycosphingolipid biosynthesis - ganglio series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 2
ghi00511 Other glycan degradation 2
ghi00531 Glycosaminoglycan degradation 2
ghi00600 Sphingolipid metabolism 2
ghi00604 Glycosphingolipid biosynthesis - ganglio series 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 3
bna03040 Spliceosome 2
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03013 Nucleocytoplasmic transport 2
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838344 100804533 100813793 101258763 4350254 103652996 103872551 100257006 11420262 11444918 123113279 123122792 123452182 107931920 107947032 106427155 66055179 5721885 8085150 102594364 102608664 102627555 100831287 107760391 107827214
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