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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   FAD2-1B   omega-6 fatty acid desaturase 
 gma-r.7   FAD2-1B   omega-6 fatty acid desaturase 
 gma-u.5   FAD2-2D   fatty acid desaturase-2 
 gma-u.5   FAD2-1A   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1 
 gma-u.5   FAD2-2   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 
 mtr-u.5   11444765   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 
 mtr-u.5   25483518   delta(12)-fatty-acid desaturase FAD2 
 ppo-u.5   7483979   delta(12)-fatty-acid desaturase FAD2 
 ath-u.5   FAD2   fatty acid desaturase 2 
 bra-r.6   103870276   omega-6 fatty acid desaturase, endoplasmic reticulum 
 vvi-u.5   100258789   omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like 
 vvi-u.5   100252129   delta(12)-fatty-acid desaturase FAD2 
 ghi-r.1   107941903   delta(12)-fatty-acid desaturase FAD2 
 ghi-r.1   107924178   delta(12)-fatty-acid desaturase FAD2 
 ghi-r.1   107921152   delta(12)-fatty-acid desaturase FAD2-like 
 bna-r.1   106452409   omega-6 fatty acid desaturase, endoplasmic reticulum 
 bna-r.1   106417584   omega-6 fatty acid desaturase, endoplasmic reticulum-like 
 cit-r.1   102611163   delta(12)-fatty-acid desaturase FAD2 
 cit-r.1   102627239   delta(12)-fatty-acid desaturase FAD2 
 sly-u.5   101259966   delta(12)-fatty-acid desaturase 
 sly-u.5   SlFAD2-7   delta(12)-fatty-acid desaturase 
 sly-u.5   101250481   delta(12)-fatty-acid desaturase 
 sot-r.1   102598267   delta(12) oleic acid desaturase FAD2-like 
 sot-r.1   102600240   delta(12) oleic acid desaturase FAD2-like 
 sot-r.1   102579518   delta(12) oleic acid desaturase FAD2-like 
 nta-r.1   107773163   delta(12)-fatty-acid desaturase FAD2-like 
 nta-r.1   107823061   delta(12)-acyl-lipid-desaturase-like 
 nta-r.1   107829678   delta(12)-fatty-acid desaturase FAD2-like 
 osa-u.5   4330523   fatty acid desaturase DES2 
 osa-u.5   4343026   fatty acid desaturase DES2 
 osa-u.5   4343027   fatty acid desaturase DES2 
 zma-u.5   118475586   fatty acid desaturase DES2-like 
 zma-u.5   100191328   delta-12 fatty acid desaturaseFAD2 
 zma-u.5   103640919   fatty acid desaturase DES2 
 tae-r.2   123145293   fatty acid desaturase DES2 
 tae-r.2   123145289   fatty acid desaturase DES2-like 
 tae-r.2   123145295   fatty acid desaturase DES2-like 
 hvu-r.1   123405501   fatty acid desaturase DES2 
 sbi-r.1   110435045   fatty acid desaturase DES2 
 sbi-r.1   8066368   fatty acid desaturase DES2 
 bdi-r.1   100837786   fatty acid desaturase DES2 
 bdi-r.1   100835723   fatty acid desaturase DES2 
 cre-r.1   CHLRE_17g711150v5   uncharacterized protein 

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Top 50 coexpressed genes to FAD2-1B (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to FAD2-1B (gma-u.5 coexpression data)

CoexMap"100805777"


gmaFAD2-1B | Entrez gene ID : 100805777      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 2 1 1 1 2 3 2 2 3 3 3 3 3 3 1 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx01040 [list] [network] Biosynthesis of unsaturated fatty acids (39 genes)
gmx01212 [list] [network] Fatty acid metabolism (121 genes)
GO BP
GO:0006629 [list] [network] lipid metabolic process  (1302 genes)  IEA  
GO CC
GO MF
GO:0016717 [list] [network] oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water  (29 genes)  IEA  
Protein NP_001341865.1 [sequence] [blastp]
XP_006605882.1 [sequence] [blastp]
XP_006605883.1 [sequence] [blastp]
XP_006605884.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 2,  chlo_mito 2,  E.R. 1,  cyto_plas 1  (predict for NP_001341865.1)
chlo 3,  cyto 2,  E.R. 2,  cyto_E.R. 2  (predict for XP_006605882.1)
chlo 3,  cyto 2,  E.R. 2,  cyto_E.R. 2  (predict for XP_006605883.1)
chlo 3,  cyto 2,  E.R. 2,  cyto_E.R. 2  (predict for XP_006605884.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for NP_001341865.1)
other 8  (predict for XP_006605882.1)
other 8  (predict for XP_006605883.1)
other 8  (predict for XP_006605884.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
FAD2-1B
gma-r.7
for
FAD2-1B
gma-u.5
for
FAD2-2D
gma-u.5
for
FAD2-1A
gma-u.5
for
FAD2-2
mtr-u.5
for
11444765
mtr-u.5
for
25483518
ppo-u.5
for
7483979
ath-u.5
for
FAD2
bra-r.6
for
103870276
vvi-u.5
for
100258789
vvi-u.5
for
100252129
ghi-r.1
for
107941903
ghi-r.1
for
107924178
ghi-r.1
for
107921152
bna-r.1
for
106452409
bna-r.1
for
106417584
cit-r.1
for
102611163
cit-r.1
for
102627239
sly-u.5
for
101259966
sly-u.5
for
SlFAD2-7
sly-u.5
for
101250481
sot-r.1
for
102598267
sot-r.1
for
102600240
sot-r.1
for
102579518
nta-r.1
for
107773163
nta-r.1
for
107823061
nta-r.1
for
107829678
osa-u.5
for
4330523
osa-u.5
for
4343026
osa-u.5
for
4343027
zma-u.5
for
118475586
zma-u.5
for
100191328
zma-u.5
for
103640919
tae-r.2
for
123145293
tae-r.2
for
123145289
tae-r.2
for
123145295
hvu-r.1
for
123405501
sbi-r.1
for
110435045
sbi-r.1
for
8066368
bdi-r.1
for
100837786
bdi-r.1
for
100835723
cre-r.1
for
CHLRE_17g711150v5


Ortholog ID: 1460
Species gma gma gma mtr mtr ppo ppo ath bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae hvu sbi sbi bdi bdi cre
Symbol FAD2-1B FAD2-2D FAD2-2B LOC11444765 LOC25483518 LOC7483979 LOC7483273 FAD2 LOC103870276 LOC100258789 LOC100252129 LOC107941903 LOC107921152 LOC107934594 LOC106452409 LOC106417584 LOC106452523 LOC102611163 LOC102627239 SlFAD2-7 LOC101250481 cevi19 LOC102600240 LOC102579518 LOC102596973 LOC107829678 LOC107831844 LOC107814090 LOC4330523 LOC4343026 LOC4343027 LOC118475586 LOC103640919 LOC100273207 LOC123145293 LOC123145289 LOC123405501 LOC110435045 LOC8066368 LOC100837786 LOC100835723 CHLRE_17g711150v5
Function* omega-6 fatty acid desaturase fatty acid desaturase-2 fatty acid desaturase-2 omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2 delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2 delta(12)-acyl-lipid-desaturase fatty acid desaturase 2 omega-6 fatty acid desaturase, endoplasmic reticulum omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2-like omega-6 fatty acid desaturase, endoplasmic reticulum omega-6 fatty acid desaturase, endoplasmic reticulum-like omega-6 fatty acid desaturase, endoplasmic reticulum delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase FAD2 delta(12)-fatty-acid desaturase delta(12)-fatty-acid desaturase delta(12)-fatty-acid desaturase delta(12) oleic acid desaturase FAD2-like delta(12) oleic acid desaturase FAD2-like delta(12) oleic acid desaturase FAD2-like delta(12)-fatty-acid desaturase FAD2-like delta(12)-acyl-lipid-desaturase delta(12)-fatty-acid desaturase FAD2 fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2-like fatty acid desaturase DES2 Delta(12)-fatty-acid desaturase fatty acid desaturase DES2 fatty acid desaturase DES2-like fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 fatty acid desaturase DES2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01040 Biosynthesis of unsaturated fatty acids 2
gma01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00910 Nitrogen metabolism 4
gma01310 Nitrogen cycle 4
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00100 Steroid biosynthesis 4
gma01040 Biosynthesis of unsaturated fatty acids 4
gma01212 Fatty acid metabolism 4
gma04082 Neuroactive ligand signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00073 Cutin, suberine and wax biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath03083 Polycomb repressive complex 2
ath04120 Ubiquitin mediated proteolysis 2
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01040 Biosynthesis of unsaturated fatty acids 2
vvi01212 Fatty acid metabolism 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01040 Biosynthesis of unsaturated fatty acids 2
ghi01212 Fatty acid metabolism 2
ghi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01040 Biosynthesis of unsaturated fatty acids 3
bna01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00940 Phenylpropanoid biosynthesis 7
cit00360 Phenylalanine metabolism 3
cit00941 Flavonoid biosynthesis 3
cit00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01040 Biosynthesis of unsaturated fatty acids 4
sly01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 13
sot01040 Biosynthesis of unsaturated fatty acids 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01040 Biosynthesis of unsaturated fatty acids 9
sot01212 Fatty acid metabolism 9
sot00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01212 Fatty acid metabolism 13
sot01040 Biosynthesis of unsaturated fatty acids 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 4
nta00541 Biosynthesis of various nucleotide sugars 3
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00360 Phenylalanine metabolism 3
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 7
nta01040 Biosynthesis of unsaturated fatty acids 2
nta01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 3
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
osa00230 Purine metabolism 2
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 10
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00904 Diterpenoid biosynthesis 10
osa01040 Biosynthesis of unsaturated fatty acids 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01212 Fatty acid metabolism 5
zma01040 Biosynthesis of unsaturated fatty acids 4
zma00280 Valine, leucine and isoleucine degradation 2
zma00650 Butanoate metabolism 2
zma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00909 Sesquiterpenoid and triterpenoid biosynthesis 3
zma01040 Biosynthesis of unsaturated fatty acids 2
zma01212 Fatty acid metabolism 2
zma00280 Valine, leucine and isoleucine degradation 2
zma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 5
tae01040 Biosynthesis of unsaturated fatty acids 3
tae01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01040 Biosynthesis of unsaturated fatty acids 6
tae01212 Fatty acid metabolism 6
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 5
sbi01200 Carbon metabolism 5
sbi00030 Pentose phosphate pathway 4
sbi01230 Biosynthesis of amino acids 4
sbi00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00360 Phenylalanine metabolism 8
sbi00940 Phenylpropanoid biosynthesis 8
sbi01230 Biosynthesis of amino acids 3
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sbi01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00944 Flavone and flavonol biosynthesis 2
bdi01040 Biosynthesis of unsaturated fatty acids 2
bdi01212 Fatty acid metabolism 2
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 4
bdi01040 Biosynthesis of unsaturated fatty acids 2
bdi01212 Fatty acid metabolism 2
bdi00196 Photosynthesis - antenna proteins 2
bdi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100805777 100780912 100805040 11444765 25483518 7483979 7483273 820387 103870276 100258789 100252129 107941903 107921152 107934594 106452409 106417584 106452523 102611163 102627239 101255474 101250481 544107 102600240 102579518 102596973 107829678 107831844 107814090 4330523 4343026 4343027 118475586 103640919 100273207 123145293 123145289 123405501 110435045 8066368 100837786 100835723 5717125
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