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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100806021   protein-tyrosine-phosphatase IBR5 
 gma-r.7   100806021   protein-tyrosine-phosphatase IBR5 
 gma-u.5   100808721   protein-tyrosine-phosphatase IBR5 
 mtr-u.5   11420754   protein-tyrosine-phosphatase IBR5 
 ppo-u.5   7455681   protein-tyrosine-phosphatase IBR5 
 ath-u.5   IBR5   indole-3-butyric acid response 5 
 vvi-u.5   100249965   protein-tyrosine-phosphatase IBR5 
 sly-u.5   101267250   protein-tyrosine-phosphatase IBR5 
 sly-u.5   101252462   protein-tyrosine-phosphatase IBR5 
 osa-u.5   4330549   protein-tyrosine-phosphatase IBR5 
 osa-u.5   4340847   protein-tyrosine-phosphatase IBR5 
 zma-u.5   100285381   dual specificity protein phosphatase 4 
 zma-u.5   100285227   uncharacterized LOC100285227 

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Top 50 coexpressed genes to 100806021 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100806021 (gma-u.5 coexpression data)

CoexMap"100806021"


gmaLOC100806021 | Entrez gene ID : 100806021      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04148 [list] [network] Efferocytosis (107 genes)
GO BP
GO:0043407 [list] [network] negative regulation of MAP kinase activity  (2 genes)  IEA  
GO:0009734 [list] [network] auxin-activated signaling pathway  (44 genes)  IEA  
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (57 genes)  IEA  
GO:0006470 [list] [network] protein dephosphorylation  (213 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0033549 [list] [network] MAP kinase phosphatase activity  (4 genes)  IEA  
GO:0008138 [list] [network] protein tyrosine/serine/threonine phosphatase activity  (33 genes)  IEA  
Protein XP_003545615.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  pero 4,  chlo 1,  cyto 1,  mito 1  (predict for XP_003545615.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003545615.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100806021
gma-r.7
for
100806021
gma-u.5
for
100808721
mtr-u.5
for
11420754
ppo-u.5
for
7455681
ath-u.5
for
IBR5
vvi-u.5
for
100249965
sly-u.5
for
101267250
sly-u.5
for
101252462
osa-u.5
for
4330549
osa-u.5
for
4340847
zma-u.5
for
100285381
zma-u.5
for
100285227


Ortholog ID: 4335
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100808721 LOC100806021 LOC11420754 LOC7455681 IBR5 LOC103828529 LOC103860307 LOC100249965 LOC121232141 LOC107955728 LOC106357784 LOC111210588 LOC102631010 LOC101267250 LOC101252462 LOC102582090 LOC102579669 LOC107801872 LOC107798553 LOC4330549 LOC4340847 LOC100285227 LOC100285381 LOC123156251 LOC123164991 LOC123402502 LOC123407850 LOC8071772 LOC8072850 LOC100842961 LOC100843241 CHLRE_03g193350v5
Function* protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 indole-3-butyric acid response 5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 uncharacterized LOC100285227 dual specificity protein phosphatase 4 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5-like protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 protein-tyrosine-phosphatase IBR5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 2
gma00640 Propanoate metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00280 Valine, leucine and isoleucine degradation 5
ppo04148 Efferocytosis 2
ppo00310 Lysine degradation 2
ppo01200 Carbon metabolism 2
ppo00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi00561 Glycerolipid metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04136 Autophagy - other 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly03020 RNA polymerase 2
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta03050 Proteasome 2
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03060 Protein export 4
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 4
tae04148 Efferocytosis 3
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808721 100806021 11420754 7455681 814997 103828529 103860307 100249965 121232141 107955728 106357784 111210588 102631010 101267250 101252462 102582090 102579669 107801872 107798553 4330549 4340847 100285227 100285381 123156251 123164991 123402502 123407850 8071772 8072850 100842961 100843241 5718699
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