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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100806055  UPF0308 protein At2g37240, chloroplastic-like 
 gma-r.7  100806055  UPF0308 protein At2g37240, chloroplastic-like 
 gma-u.5  100805527  UPF0308 protein At2g37240, chloroplastic-like 
 mtr-u.5  11413408  thioredoxin-like protein AAED1, chloroplastic 
 ppo-u.5  7497309  thioredoxin-like protein AAED1, chloroplastic 
 ath-u.5  AT5G65840  Thioredoxin superfamily protein 
 bra-r.6  103837598  thioredoxin-like protein AAED1, chloroplastic 
 vvi-u.5  100245543  uncharacterized LOC100245543 
 vvi-u.5  100256614  type II peroxiredoxin 1 
 ghi-r.1  121208268  thioredoxin-like protein AAED1, chloroplastic 
 ghi-r.1  107945342  prostamide/prostaglandin F synthase 
 ghi-r.1  107914349  thioredoxin-like protein AAED1, chloroplastic 
 bna-r.1  106411654  thioredoxin-like protein AAED1, chloroplastic 
 bna-r.1  106441236  thioredoxin-like protein AAED1, chloroplastic 
 cit-r.1  102618460  uncharacterized LOC102618460 
 sly-u.5  101248840  thioredoxin-like protein AAED1, chloroplastic 
 sot-r.1  102585914  prostamide/prostaglandin F synthase 
 nta-r.1  107801506  thioredoxin-like protein AAED1, chloroplastic 
 nta-r.1  107780627  thioredoxin-like protein AAED1, chloroplastic 
 osa-u.5  4333987  thioredoxin-like protein AAED1, chloroplastic 
 osa-u.5  4333988  thioredoxin-like protein AAED1, chloroplastic 
 zma-u.5  100384338  uncharacterized LOC100384338 
 zma-u.5  100275311  uncharacterized LOC100275311 
 tae-r.2  123087004  prostamide/prostaglandin F synthase 
 hvu-r.1  123447652  thioredoxin-like protein AAED1, chloroplastic 
 hvu-r.1  123447658  prostamide/prostaglandin F synthase-like 
 sbi-r.1  8059958  thioredoxin-like protein AAED1, chloroplastic 
 sbi-r.1  8060536  prostamide/prostaglandin F synthase 
 bdi-r.1  100834972  prostamide/prostaglandin F synthase 
 bdi-r.1  100839157  thioredoxin-like protein AAED1, chloroplastic 
 cre-r.1  CHLRE_16g649250v5  uncharacterized protein 
 cre-r.1  CHLRE_06g278096v5  uncharacterized protein 
 cre-r.1  CHLRE_17g697050v5  uncharacterized protein 

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Top 50 coexpressed genes to 100806055 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100806055 (gma-u.5 coexpression data)

CoexMap"100806055"


gmaLOC100806055 | Entrez gene ID : 100806055
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 2 3 2 1 1 1 2 2 2 1 2 2 2 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
Protein NP_001241147.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001241147.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001241147.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100806055


gma-r.7
for
100806055


gma-u.5
for
100805527


mtr-u.5
for
11413408


ppo-u.5
for
7497309


ath-u.5
for
AT5G65840


bra-r.6
for
103837598


vvi-u.5
for
100245543


vvi-u.5
for
100256614


ghi-r.1
for
121208268


ghi-r.1
for
107945342


ghi-r.1
for
107914349


bna-r.1
for
106411654


bna-r.1
for
106441236


cit-r.1
for
102618460


sly-u.5
for
101248840


sot-r.1
for
102585914


nta-r.1
for
107801506


nta-r.1
for
107780627


osa-u.5
for
4333987


osa-u.5
for
4333988


zma-u.5
for
100384338


zma-u.5
for
100275311


tae-r.2
for
123087004


hvu-r.1
for
123447652


hvu-r.1
for
123447658


sbi-r.1
for
8059958


sbi-r.1
for
8060536


bdi-r.1
for
100834972


bdi-r.1
for
100839157


cre-r.1
for
CHLRE_16g649250v5


cre-r.1
for
CHLRE_06g278096v5


cre-r.1
for
CHLRE_17g697050v5



Ortholog ID: 5607
Species gma gma mtr ppo ath bra vvi vvi ghi ghi ghi bna bna cit sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre cre cre
Symbol LOC100806055 LOC100805527 LOC11413408 LOC7497309 AT5G65840 LOC103837598 LOC100245543 LOC100256614 LOC121208268 LOC107945342 LOC107914349 LOC106411654 LOC106441236 LOC102618460 LOC101248840 LOC102585914 LOC107801506 LOC107780627 LOC4333987 LOC4333988 LOC100384338 LOC100275311 LOC123094403 LOC123090964 LOC123447652 LOC123447658 LOC8059958 LOC8060536 LOC100834972 LOC100839157 CHLRE_16g649250v5 CHLRE_06g278096v5 CHLRE_17g697050v5
Function* UPF0308 protein At2g37240, chloroplastic-like UPF0308 protein At2g37240, chloroplastic-like thioredoxin-like protein AAED1, chloroplastic thioredoxin-like protein AAED1, chloroplastic Thioredoxin superfamily protein thioredoxin-like protein AAED1, chloroplastic uncharacterized LOC100245543 type II peroxiredoxin 1 thioredoxin-like protein AAED1, chloroplastic prostamide/prostaglandin F synthase thioredoxin-like protein AAED1, chloroplastic thioredoxin-like protein AAED1, chloroplastic thioredoxin-like protein AAED1, chloroplastic uncharacterized LOC102618460 thioredoxin-like protein AAED1, chloroplastic prostamide/prostaglandin F synthase thioredoxin-like protein AAED1, chloroplastic thioredoxin-like protein AAED1, chloroplastic thioredoxin-like protein AAED1, chloroplastic thioredoxin-like protein AAED1, chloroplastic uncharacterized LOC100384338 uncharacterized LOC100275311 prostamide/prostaglandin F synthase thioredoxin-like protein AAED1, chloroplastic thioredoxin-like protein AAED1, chloroplastic prostamide/prostaglandin F synthase-like thioredoxin-like protein AAED1, chloroplastic prostamide/prostaglandin F synthase prostamide/prostaglandin F synthase thioredoxin-like protein AAED1, chloroplastic uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 2
gma00250 Alanine, aspartate and glutamate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi03420 Nucleotide excision repair 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi04146 Peroxisome 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 3
cit01200 Carbon metabolism 3
cit03040 Spliceosome 2
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00030 Pentose phosphate pathway 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100806055 100805527 11413408 7497309 836713 103837598 100245543 100256614 121208268 107945342 107914349 106411654 106441236 102618460 101248840 102585914 107801506 107780627 4333987 4333988 100384338 100275311 123094403 123090964 123447652 123447658 8059958 8060536 100834972 100839157 5723816 5723596 5717374
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