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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100806799   splicing factor 3B subunit 3 
 gma-r.7   100806799   splicing factor 3B subunit 3 
 gma-u.5   100799711   splicing factor 3B subunit 3 
 mtr-u.5   25499564   splicing factor 3B subunit 3 
 ppo-u.5   7455620   uncharacterized LOC7455620 
 ath-u.5   AT3G11960   Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 
 vvi-u.5   100252096   pre-mRNA-splicing factor prp12 
 sly-u.5   101261183   uncharacterized LOC101261183 
 osa-u.5   4342674   uncharacterized LOC4342674 
 zma-u.5   103632101   splicing factor 3B subunit 3 

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Top 50 coexpressed genes to 100806799 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100806799 (gma-u.5 coexpression data)

CoexMap"100806799"


gmaLOC100806799 | Entrez gene ID : 100806799      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03040 [list] [network] Spliceosome (466 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (282 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (43 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0030620 [list] [network] U2 snRNA binding  (8 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006577112.1 [sequence] [blastp]
XP_006577113.1 [sequence] [blastp]
XP_006577114.1 [sequence] [blastp]
XP_014629419.1 [sequence] [blastp]
XP_014629420.1 [sequence] [blastp]
XP_014629421.1 [sequence] [blastp]
XP_025983696.1 [sequence] [blastp]
XP_040870099.1 [sequence] [blastp]
XP_040870100.1 [sequence] [blastp]
XP_040870101.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  E.R. 2,  nucl 1,  vacu 1  (predict for XP_006577112.1)
plas 6,  E.R. 2,  nucl 1,  vacu 1  (predict for XP_006577113.1)
nucl 4,  E.R. 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_006577114.1)
plas 7,  E.R. 1,  nucl 1,  vacu 1,  cyto_E.R. 1  (predict for XP_014629419.1)
nucl 5,  E.R. 2,  cyto 1,  E.R._vacu 1  (predict for XP_014629420.1)
nucl 4,  cyto 2,  E.R. 2,  cysk_nucl 2,  nucl_plas 2,  cyto_E.R. 2  (predict for XP_014629421.1)
nucl 5,  E.R. 2,  cyto 1,  E.R._vacu 1  (predict for XP_025983696.1)
nucl 5,  E.R. 2,  cyto 1,  E.R._vacu 1  (predict for XP_040870099.1)
nucl 5,  E.R. 2,  cyto 1,  E.R._vacu 1  (predict for XP_040870100.1)
nucl 5,  E.R. 2,  cyto 1,  E.R._vacu 1  (predict for XP_040870101.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_006577112.1)
chlo 9  (predict for XP_006577113.1)
chlo 9  (predict for XP_006577114.1)
chlo 9  (predict for XP_014629419.1)
chlo 9  (predict for XP_014629420.1)
chlo 9  (predict for XP_014629421.1)
chlo 9  (predict for XP_025983696.1)
chlo 9  (predict for XP_040870099.1)
chlo 9  (predict for XP_040870100.1)
chlo 9  (predict for XP_040870101.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100806799
gma-r.7
for
100806799
gma-u.5
for
100799711
mtr-u.5
for
25499564
ppo-u.5
for
7455620
ath-u.5
for
AT3G11960
vvi-u.5
for
100252096
sly-u.5
for
101261183
osa-u.5
for
4342674
zma-u.5
for
103632101


Ortholog ID: 8453
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100806799 LOC100799711 LOC25499564 LOC7455620 AT3G11960 LOC103870295 LOC103859423 LOC100252096 LOC107891227 LOC107889475 LOC106452512 LOC106401173 LOC102624787 LOC101261183 LOC102600929 LOC107784860 LOC107775427 LOC4342674 LOC103632101 LOC123188638 LOC123052774 LOC123426147 LOC8063686 LOC100839023
Function* splicing factor 3B subunit 3 splicing factor 3B subunit 3 splicing factor 3B subunit 3 uncharacterized LOC7455620 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein splicing factor 3B subunit 3 spliceosome-associated protein 130 A pre-mRNA-splicing factor prp12 splicing factor 3B subunit 3 splicing factor 3B subunit 3 splicing factor 3B subunit 3 spliceosome-associated protein 130 A-like uncharacterized LOC102624787 uncharacterized LOC101261183 pre-mRNA-splicing factor prp12 uncharacterized LOC107784860 uncharacterized LOC107775427 uncharacterized LOC4342674 splicing factor 3B subunit 3 splicing factor 3B subunit 3 splicing factor 3B subunit 3 DNA damage-binding protein 1 splicing factor 3B subunit 3 splicing factor 3B subunit 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 8
gma03040 Spliceosome 3
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03040 Spliceosome 2
gma03082 ATP-dependent chromatin remodeling 2
gma04712 Circadian rhythm - plant 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03082 ATP-dependent chromatin remodeling 2
bra03440 Homologous recombination 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
bra04120 Ubiquitin mediated proteolysis 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04136 Autophagy - other 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04712 Circadian rhythm - plant 2
bna04142 Lysosome 2
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03082 ATP-dependent chromatin remodeling 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100806799 100799711 25499564 7455620 820369 103870295 103859423 100252096 107891227 107889475 106452512 106401173 102624787 101261183 102600929 107784860 107775427 4342674 103632101 123188638 123052774 123426147 8063686 100839023
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