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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100807282   AMSH-like ubiquitin thioesterase 2 
 gma-r.7   100807282   AMSH-like ubiquitin thioesterase 2 
 mtr-u.5   11406347   AMSH-like ubiquitin thioesterase 2 
 ppo-u.5   7492397   AMSH-like ubiquitin thioesterase 2 
 ath-u.5   AMSH2   associated molecule with the SH3 domain of STAM 2 
 vvi-u.5   100852697   AMSH-like ubiquitin thioesterase 2 
 osa-u.5   4327852   AMSH-like ubiquitin thioesterase 2 
 zma-u.5   100191225   AMSH-like ubiquitin thioesterase 2 

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Top 50 coexpressed genes to 100807282 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100807282 (gma-u.5 coexpression data)

CoexMap"100807282"


gmaLOC100807282 | Entrez gene ID : 100807282      
Species gma mtr ppo ath vvi osa zma sly sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04144 [list] [network] Endocytosis (291 genes)
GO BP
GO:0070536 [list] [network] protein K63-linked deubiquitination  (10 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (326 genes)  IEA  
GO:0016020 [list] [network] membrane  (5894 genes)  IEA  
GO MF
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (7 genes)  IEA  
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (7 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003517724.1 [sequence] [blastp]
XP_040860827.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  plas 1,  golg_plas 1,  cyto 1  (predict for XP_003517724.1)
nucl 5,  mito 1,  extr 1,  chlo 1,  cyto 1,  cysk 1,  cyto_mito 1,  mito_plas 1  (predict for XP_040860827.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003517724.1)
other 9  (predict for XP_040860827.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100807282

.
gma-r.7
for
100807282

.
mtr-u.5
for
11406347

.
ppo-u.5
for
7492397

.
ath-u.5
for
AMSH2

.
vvi-u.5
for
100852697

.
osa-u.5
for
4327852

.
zma-u.5
for
100191225

.


Ortholog ID: 10445
Species ath gma osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta
Symbol AMSH2 LOC100807282 LOC4327852 LOC100191225 LOC103871842 LOC100852697 LOC7492397 LOC11406347 LOC123078721 LOC123070276 LOC123444022 LOC107909669 LOC107886586 LOC106357924 LOC125575362 CHLRE_01g024300v5 LOC110433847 LOC102579319 LOC102615340 LOC100844070 LOC107813862
Function* associated molecule with the SH3 domain of STAM 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 3 uncharacterized protein AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2 AMSH-like ubiquitin thioesterase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 3
mtr01240 Biosynthesis of cofactors 3
mtr00280 Valine, leucine and isoleucine degradation 2
mtr00310 Lysine degradation 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04075 Plant hormone signal transduction 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna03018 RNA degradation 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 8
cre03272 Virion - Hepatitis viruses 4
cre03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi00020 Citrate cycle (TCA cycle) 2
bdi01200 Carbon metabolism 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837603 100807282 4327852 100191225 103871842 100852697 7492397 11406347 123078721 123070276 123444022 107909669 107886586 106357924 125575362 5715257 110433847 102579319 102615340 100844070 107813862
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