ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100808779	uncharacterized LOC100808779
gma-r.7	100808779	uncharacterized LOC100808779
gma-m.5	100808779	uncharacterized LOC100808779
gma-u.5	100791240	uncharacterized LOC100791240
gma-u.5	100809863	MhpC domain-containing protein
gma-u.5	100803294	uncharacterized LOC100803294
mtr-u.5	11413714	uncharacterized LOC11413714
mtr-u.5	11408128	uncharacterized LOC11408128
mtr-u.5	11446348	uncharacterized LOC11446348
ppo-u.5	7486912	uncharacterized LOC7486912
ppo-u.5	18101305	uncharacterized LOC18101305
ppo-u.5	7477173	uncharacterized LOC7477173
ath-u.5	AT2G36290	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT1G74300	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT1G74290	alpha/beta-Hydrolases superfamily protein
vvi-u.5	100258740	uncharacterized LOC100258740
vvi-u.5	100263058	uncharacterized LOC100263058
vvi-u.5	100248360	uncharacterized LOC100248360
sly-u.5	101262038	uncharacterized LOC101262038
sly-u.5	101261444	alpha/beta-hydrolases superfamily protein
sly-u.5	101261148	uncharacterized LOC101261148
osa-u.5	4351521	uncharacterized LOC4351521
osa-u.5	4329550	uncharacterized LOC4329550
osa-u.5	4335776	uncharacterized LOC4335776
zma-u.5	100272325	uncharacterized LOC100272325
zma-u.5	100272635	uncharacterized LOC100272635

Top 50 coexpressed genes to 100808779 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100808779 (gma-u.5 coexpression data)

CoexMap"100808779"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_003540244.1 [sequence] [blastp]
XP_006592750.1 [sequence] [blastp]
XP_006592752.1 [sequence] [blastp]
XP_006592753.1 [sequence] [blastp]
XP_006592754.1 [sequence] [blastp]
XP_006592756.1 [sequence] [blastp]
XP_006592758.1 [sequence] [blastp]
XP_006592759.1 [sequence] [blastp]
XP_006592760.1 [sequence] [blastp]
XP_006592761.1 [sequence] [blastp]
XP_006592762.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_003540244.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592750.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592752.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592753.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592754.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592756.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592758.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592759.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592760.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592761.1)
extr 4, vacu 2, cyto 1, chlo 1, nucl 1, mito 1, plas 1, chlo_mito 1, nucl_plas 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1	(predict for XP_006592762.1)

Subcellular
localization
TargetP

scret 7	(predict for XP_003540244.1)
scret 7	(predict for XP_006592750.1)
scret 7	(predict for XP_006592752.1)
scret 7	(predict for XP_006592753.1)
scret 7	(predict for XP_006592754.1)
scret 7	(predict for XP_006592756.1)
scret 7	(predict for XP_006592758.1)
scret 7	(predict for XP_006592759.1)
scret 7	(predict for XP_006592760.1)
scret 7	(predict for XP_006592761.1)
scret 7	(predict for XP_006592762.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100808779	gma-r.7 for 100808779	gma-m.5 for 100808779	gma-u.5 for 100791240	gma-u.5 for 100809863	gma-u.5 for 100803294	mtr-u.5 for 11413714	mtr-u.5 for 11408128	mtr-u.5 for 11446348	ppo-u.5 for 7486912	ppo-u.5 for 18101305	ppo-u.5 for 7477173	ath-u.5 for AT2G36290	ath-u.5 for AT1G74300	ath-u.5 for AT1G74290	vvi-u.5 for 100258740	vvi-u.5 for 100263058	vvi-u.5 for 100248360	sly-u.5 for 101262038	sly-u.5 for 101261444	sly-u.5 for 101261148	osa-u.5 for 4351521	osa-u.5 for 4329550	osa-u.5 for 4335776	zma-u.5 for 100272325	zma-u.5 for 100272635

Ortholog

Ortholog ID: 268

Species

gma

mtr

ppo

ath

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100500491

uncharacterized LOC100808779

uncharacterized LOC11408128

uncharacterized LOC25483834

uncharacterized LOC7491626

uncharacterized LOC18101305

alpha/beta-Hydrolases superfamily protein

uncharacterized LOC100248360

uncharacterized LOC107948289

uncharacterized LOC107889168

uncharacterized LOC106419732

uncharacterized LOC102616911

hypothetical protein

uncharacterized LOC101251591

uncharacterized LOC101260564

uncharacterized LOC102603800

uncharacterized LOC102583578

uncharacterized LOC107773957

uncharacterized LOC107782665

uncharacterized LOC4351521

uncharacterized LOC4329550

uncharacterized LOC100280362

uncharacterized LOC123144194

uncharacterized LOC123126800

uncharacterized LOC123415595

uncharacterized LOC123449924

uncharacterized LOC8072964

uncharacterized LOC100836884

uncharacterized hydrolase YugF

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	4
gma03013	Nucleocytoplasmic transport	3
gma03015	mRNA surveillance pathway	3
gma03040	Spliceosome	3
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00750	Vitamin B6 metabolism	4
mtr01240	Biosynthesis of cofactors	4
mtr00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	6
mtr03050	Proteasome	2
mtr03040	Spliceosome	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	4
ppo03010	Ribosome	3
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00941	Flavonoid biosynthesis	5
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00941	Flavonoid biosynthesis	5
vvi00944	Flavone and flavonol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00670	One carbon pool by folate	2
ghi04981	Folate transport and metabolism	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	6
ghi00566	Sulfoquinovose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00630	Glyoxylate and dicarboxylate metabolism	3
bna01200	Carbon metabolism	3
bna04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	4
cit03015	mRNA surveillance pathway	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00564	Glycerophospholipid metabolism	3
sly00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01230	Biosynthesis of amino acids	8
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	2
sot00350	Tyrosine metabolism	2
sot00360	Phenylalanine metabolism	2
sot00410	beta-Alanine metabolism	2
sot00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00900	Terpenoid backbone biosynthesis	11
nta00020	Citrate cycle (TCA cycle)	6
nta00280	Valine, leucine and isoleucine degradation	3
nta00650	Butanoate metabolism	3
nta04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04142	Lysosome	3
nta04626	Plant-pathogen interaction	2
nta00430	Taurine and hypotaurine metabolism	2
nta00460	Cyanoamino acid metabolism	2
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	4
tae04016	MAPK signaling pathway - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	7
tae00130	Ubiquinone and other terpenoid-quinone biosynthesis	6
tae00941	Flavonoid biosynthesis	3
tae00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
tae00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	6
hvu00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
hvu00941	Flavonoid biosynthesis	2
hvu00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2
hvu01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00941	Flavonoid biosynthesis	6
sbi00944	Flavone and flavonol biosynthesis	3
sbi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	10
bdi00360	Phenylalanine metabolism	5
bdi00130	Ubiquinone and other terpenoid-quinone biosynthesis	4
bdi00941	Flavonoid biosynthesis	3
bdi00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100500491

100808779

11408128

25483834

7491626

18101305

818200

100248360

107948289

107889168

106419732

102616911

102628744

101251591

101260564

102603800

102583578

107773957

107782665

4351521

4329550

100280362

123144194

123126800

123415595

123449924

8072964

100836884

100835900

5718878

The preparation time of this page was 0.2 [sec].


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	6	3	3	3	3	3	3	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100808779 (gma-u.5 coexpression data)

Top 50 enrichment test to 100808779 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**