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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100809122   tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 
 gma-r.7   100809122   tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 
 gma-m.5   100809122   tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 
 gma-u.5   100786310   tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 
 mtr-u.5   25499138   tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 
 ppo-u.5   7464687   uncharacterized LOC7464687 
 ath-u.5   TRM82   Transducin/WD40 repeat-like superfamily protein 
 vvi-u.5   100855304   COMPASS-like H3K4 histone methylase component WDR5A 
 sly-u.5   101249926   uncharacterized LOC101249926 
 osa-u.5   4334092   uncharacterized LOC4334092 
 zma-u.5   100273070   uncharacterized LOC100273070 

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Top 50 coexpressed genes to 100809122 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100809122 (gma-u.5 coexpression data)

CoexMap"100809122"


gmaLOC100809122 | Entrez gene ID : 100809122      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036265 [list] [network] RNA (guanine-N7)-methylation  (13 genes)  IEA  
GO:0006400 [list] [network] tRNA modification  (125 genes)  IEA  
GO CC
GO:0043527 [list] [network] tRNA methyltransferase complex  (11 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003520572.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  plas 2,  E.R. 2,  E.R._plas 2  (predict for XP_003520572.1)
Subcellular
localization
TargetP
other 6  (predict for XP_003520572.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100809122

.
gma-r.7
for
100809122

.
gma-m.5
for
100809122

.
gma-u.5
for
100786310

.
mtr-u.5
for
25499138

.
ppo-u.5
for
7464687

.
ath-u.5
for
TRM82

.
vvi-u.5
for
100855304

.
sly-u.5
for
101249926

.
osa-u.5
for
4334092

.
zma-u.5
for
100273070

.


Ortholog ID: 7433
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol TRM82 LOC100786310 LOC100809122 LOC101249926 LOC4334092 LOC100273070 LOC103843704 LOC103836631 LOC100855304 LOC7464687 LOC25499138 LOC123113298 LOC123122806 LOC123452203 LOC107930519 LOC106400596 LOC106401184 CHLRE_08g374800v5 LOC8060478 LOC8058446 LOC102591334 LOC102607743 LOC100845342 LOC142179366 LOC107759320
Function* Transducin/WD40 repeat-like superfamily protein tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 uncharacterized LOC101249926 uncharacterized LOC4334092 uncharacterized LOC100273070 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 COMPASS-like H3K4 histone methylase component WDR5A uncharacterized LOC7464687 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4-like uncharacterized protein tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 uncharacterized LOC8058446 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 uncharacterized LOC102607743 tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4 uncharacterized LOC142179366 uncharacterized LOC107759320
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 2
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 4
ghi03083 Polycomb repressive complex 4
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit00020 Citrate cycle (TCA cycle) 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839572 100786310 100809122 101249926 4334092 100273070 103843704 103836631 100855304 7464687 25499138 123113298 123122806 123452203 107930519 106400596 106401184 66054460 8060478 8058446 102591334 102607743 100845342 142179366 107759320
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