Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100809783   long chain base biosynthesis protein 1 
 gma-r.7   100809783   long chain base biosynthesis protein 1 
 gma-m.5   100809783   long chain base biosynthesis protein 1 
 gma-u.5   100785505   long chain base biosynthesis protein 1 
 mtr-u.5   25489027   long chain base biosynthesis protein 1 
 mtr-u.5   11407105   long chain base biosynthesis protein 1 
 mtr-u.5   11419184   long chain base biosynthesis protein 1 
 ppo-u.5   18105569   long chain base biosynthesis protein 1 
 ppo-u.5   7485168   long chain base biosynthesis protein 1 
 ath-u.5   LCB1   long-chain base1 
 vvi-u.5   100254626   long chain base biosynthesis protein 1 
 sly-u.5   101248352   long chain base biosynthesis protein 1 
 sly-u.5   101244511   long chain base biosynthesis protein 1-like 
 osa-u.5   4331075   long chain base biosynthesis protein 1b-like 
 osa-u.5   4332274   long chain base biosynthesis protein 1a-like 
 osa-u.5   4348231   long chain base biosynthesis protein 1c-like 
 zma-u.5   100281549   serine palmitoyltransferase 1 
 zma-u.5   103633646   long chain base biosynthesis protein 1a-like 

close


Top 50 coexpressed genes to 100809783 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100809783 (gma-u.5 coexpression data)

CoexMap"100809783"


gmaLOC100809783 | Entrez gene ID : 100809783      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 3 2 1 1 2 3 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00600 [list] [network] Sphingolipid metabolism (54 genes)
gmx04382 [list] [network] Cornified envelope formation (56 genes)
GO BP
GO:0046512 [list] [network] sphingosine biosynthetic process  (13 genes)  IEA  
GO:0046513 [list] [network] ceramide biosynthetic process  (21 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (889 genes)  IEA  
GO MF
GO:0004758 [list] [network] serine C-palmitoyltransferase activity  (4 genes)  IEA  
GO:0030170 [list] [network] pyridoxal phosphate binding  (149 genes)  IEA  
Protein XP_003550329.1 [sequence] [blastp]
XP_006601276.1 [sequence] [blastp]
XP_006601277.1 [sequence] [blastp]
XP_014625438.1 [sequence] [blastp]
XP_014625439.1 [sequence] [blastp]
XP_025982230.1 [sequence] [blastp]
XP_040867443.1 [sequence] [blastp]
XP_040867444.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_003550329.1)
chlo 3,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_006601276.1)
chlo 3,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_006601277.1)
chlo 3,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_014625438.1)
chlo 9,  mito 1  (predict for XP_014625439.1)
chlo 4,  nucl 1,  cyto 1,  plas 1,  E.R. 1,  cyto_nucl 1,  nucl_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_025982230.1)
chlo 3,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_040867443.1)
chlo 3,  E.R. 2,  nucl 1,  cyto 1,  cyto_nucl 1,  E.R._plas 1  (predict for XP_040867444.1)
Subcellular
localization
TargetP
scret 5,  other 5  (predict for XP_003550329.1)
scret 5,  other 5  (predict for XP_006601276.1)
scret 5,  other 5  (predict for XP_006601277.1)
scret 5,  other 5  (predict for XP_014625438.1)
chlo 7  (predict for XP_014625439.1)
scret 5,  other 5  (predict for XP_025982230.1)
scret 5,  other 5  (predict for XP_040867443.1)
scret 5,  other 5  (predict for XP_040867444.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100809783

.
gma-r.7
for
100809783

.
gma-m.5
for
100809783

.
gma-u.5
for
100785505

.
mtr-u.5
for
25489027

.
mtr-u.5
for
11407105

.
mtr-u.5
for
11419184

.
ppo-u.5
for
18105569

.
ppo-u.5
for
7485168

.
ath-u.5
for
LCB1

.
vvi-u.5
for
100254626

.
sly-u.5
for
101248352

.
sly-u.5
for
101244511

.
osa-u.5
for
4331075

.
osa-u.5
for
4332274

.
osa-u.5
for
4348231

.
zma-u.5
for
100281549

.
zma-u.5
for
103633646

.


Ortholog ID: 5158
Species ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol LCB1 LOC100809783 LOC100785505 LOC101244511 LOC101248352 LOC4331075 LOC4348231 LOC100281549 LOC103633646 LOC103868026 LCB1 LOC100254626 LOC18105569 LOC7485168 LOC11407105 LOC11419184 LOC123092743 LOC123098037 LOC123449140 LOC107925288 LOC107896900 LOC106411026 LOC106443566 CHLRE_03g146507v5 LOC8054332 LOC102597761 LOC102598572 LOC102615172 LOC100835046 LOC107795207 LOC107822881
Function* long-chain base1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1-like long chain base biosynthesis protein 1 long chain base biosynthesis protein 1b-like long chain base biosynthesis protein 1c-like serine palmitoyltransferase 1 long chain base biosynthesis protein 1a-like long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1a long chain base biosynthesis protein 1a long chain base biosynthesis protein 1a long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1 long chain base biosynthesis protein 1-like uncharacterized protein long chain base biosynthesis protein 1a long chain base biosynthesis protein 1-like long chain base biosynthesis protein 1-like long chain base biosynthesis protein 1 long chain base biosynthesis protein 1a long chain base biosynthesis protein 1 long chain base biosynthesis protein 1-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 4
gma04382 Cornified envelope formation 4
gma04075 Plant hormone signal transduction 4
gma04626 Plant-pathogen interaction 4
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04382 Cornified envelope formation 2
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00600 Sphingolipid metabolism 3
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 4
osa00600 Sphingolipid metabolism 4
osa04382 Cornified envelope formation 3
osa00061 Fatty acid biosynthesis 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00600 Sphingolipid metabolism 8
zma04382 Cornified envelope formation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04382 Cornified envelope formation 9
zma00600 Sphingolipid metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04382 Cornified envelope formation 3
bra03015 mRNA surveillance pathway 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00600 Sphingolipid metabolism 3
ppo04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 3
mtr04382 Cornified envelope formation 3
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 3
mtr04382 Cornified envelope formation 3
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 6
tae04382 Cornified envelope formation 6
tae04626 Plant-pathogen interaction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00600 Sphingolipid metabolism 6
tae04382 Cornified envelope formation 6
tae04626 Plant-pathogen interaction 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04142 Lysosome 3
hvu04144 Endocytosis 3
hvu05100 Bacterial invasion of epithelial cells 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 4
ghi04382 Cornified envelope formation 4
ghi03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 4
ghi04382 Cornified envelope formation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04382 Cornified envelope formation 9
bna03015 mRNA surveillance pathway 6
bna00600 Sphingolipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04382 Cornified envelope formation 9
bna03015 mRNA surveillance pathway 6
bna00600 Sphingolipid metabolism 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00600 Sphingolipid metabolism 2
cre04382 Cornified envelope formation 2
cre00562 Inositol phosphate metabolism 2
cre04144 Endocytosis 2
cre00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 2
sbi04382 Cornified envelope formation 2
sbi04148 Efferocytosis 2
sbi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot01232 Nucleotide metabolism 2
sot00564 Glycerophospholipid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 4
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi04626 Plant-pathogen interaction 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00600 Sphingolipid metabolism 2
nta04382 Cornified envelope formation 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829800 100809783 100785505 101244511 101248352 4331075 4348231 100281549 103633646 103868026 103862472 100254626 18105569 7485168 11407105 11419184 123092743 123098037 123449140 107925288 107896900 106411026 106443566 5721216 8054332 102597761 102598572 102615172 100835046 107795207 107822881
The preparation time of this page was 0.1 [sec].