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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100810550   sister-chromatid cohesion protein 3 
 gma-r.7   100810550   sister-chromatid cohesion protein 3 
 gma-m.5   100810550   sister-chromatid cohesion protein 3 
 mtr-u.5   25499570   sister-chromatid cohesion protein 3 
 ppo-u.5   18105325   sister-chromatid cohesion protein 3-like 
 ppo-u.5   7466176   sister-chromatid cohesion protein 3 
 ath-u.5   SCC3   sister-chromatid cohesion protein 3 
 vvi-u.5   100242474   sister-chromatid cohesion protein 3 
 sly-u.5   101267707   sister-chromatid cohesion protein 3 
 osa-u.5   4338016   sister-chromatid cohesion protein 3 
 zma-u.5   103648187   sister-chromatid cohesion protein 3 

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Top 50 coexpressed genes to 100810550 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100810550 (gma-u.5 coexpression data)

CoexMap"100810550"


gmaLOC100810550 | Entrez gene ID : 100810550      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007062 [list] [network] sister chromatid cohesion  (55 genes)  IEA  
GO CC
GO:0008278 [list] [network] cohesin complex  (12 genes)  IEA  
GO:0000785 [list] [network] chromatin  (372 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (270 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003521521.1 [sequence] [blastp]
XP_006577118.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_003521521.1)
cyto 4,  nucl 4,  chlo 1,  plas 1,  cysk 1,  cysk_plas 1  (predict for XP_006577118.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_003521521.1)
other 7,  chlo 4  (predict for XP_006577118.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100810550

.
gma-r.7
for
100810550

.
gma-m.5
for
100810550

.
mtr-u.5
for
25499570

.
ppo-u.5
for
18105325

.
ppo-u.5
for
7466176

.
ath-u.5
for
SCC3

.
vvi-u.5
for
100242474

.
sly-u.5
for
101267707

.
osa-u.5
for
4338016

.
zma-u.5
for
103648187

.


Ortholog ID: 8923
Species ath gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol SCC3 LOC100810550 LOC101267707 LOC4338016 LOC103648187 LOC103866336 LOC100242474 LOC7466176 LOC18105325 LOC25499570 LOC123096901 LOC123176089 LOC123448371 LOC107912392 LOC107923927 LOC106394370 LOC106450401 CHLRE_17g736400v5 LOC8082041 LOC102590864 LOC107057860 LOC102621685 LOC100839138 LOC107787291 LOC107813746
Function* sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3-like sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3-like uncharacterized protein sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3-like sister-chromatid cohesion protein 3-like sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3 sister-chromatid cohesion protein 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03013 Nucleocytoplasmic transport 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03430 Mismatch repair 3
gma03030 DNA replication 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03083 Polycomb repressive complex 3
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03013 Nucleocytoplasmic transport 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 2
vvi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 3
ppo03430 Mismatch repair 3
ppo03460 Fanconi anemia pathway 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03250 Viral life cycle - HIV-1 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi03018 RNA degradation 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03460 Fanconi anemia pathway 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03015 mRNA surveillance pathway 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta03015 mRNA surveillance pathway 2
nta03050 Proteasome 2
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819410 100810550 101267707 4338016 103648187 103866336 100242474 7466176 18105325 25499570 123096901 123176089 123448371 107912392 107923927 106394370 106450401 5725126 8082041 102590864 107057860 102621685 100839138 107787291 107813746
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