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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100811804   psbQ-like protein 3, chloroplastic 
 gma-r.7   100811804   psbQ-like protein 3, chloroplastic 
 gma-u.5   100784902   oxygen-evolving enhancer protein 3-1, chloroplastic-like 
 mtr-u.5   11406097   psbQ-like protein 3, chloroplastic 
 ppo-u.5   18106638   psbQ-like protein 3, chloroplastic 
 ath-u.5   PQL3   PsbQ-like 3 
 vvi-u.5   100248901   psbQ-like protein 3, chloroplastic 
 sly-u.5   104646595   psbQ-like protein 3, chloroplastic 
 osa-u.5   4336434   psbQ-like protein 3, chloroplastic 
 zma-u.5   103646199   psbQ-like protein 3, chloroplastic 

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Top 50 coexpressed genes to 100811804 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100811804 (gma-u.5 coexpression data)

CoexMap"100811804"


gmaLOC100811804 | Entrez gene ID : 100811804      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (27 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (162 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (32 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (47 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (55 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (444 genes)  IEA  
Protein XP_003553133.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_003553133.1)
Subcellular
localization
TargetP
other 3  (predict for XP_003553133.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100811804
gma-r.7
for
100811804
gma-u.5
for
100784902
mtr-u.5
for
11406097
ppo-u.5
for
18106638
ath-u.5
for
PQL3
vvi-u.5
for
100248901
sly-u.5
for
104646595
osa-u.5
for
4336434
zma-u.5
for
103646199


Ortholog ID: 11149
Species gma gma mtr ppo ath bra vvi ghi ghi cit sly nta nta osa zma hvu sbi bdi
Symbol LOC100784902 LOC100811804 LOC11406097 LOC18106638 PQL3 LOC103852321 LOC100248901 LOC121219361 LOC107936801 LOC102620573 LOC104646595 LOC107775253 LOC107831983 LOC4336434 LOC103646199 LOC123427273 LOC8082843 LOC100824557
Function* oxygen-evolving enhancer protein 3-1, chloroplastic-like psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic PsbQ-like 3 psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic psbQ-like protein 3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
mtr04146 Peroxisome 2
mtr03010 Ribosome 2
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00710 Carbon fixation by Calvin cycle 2
ppo01230 Biosynthesis of amino acids 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00630 Glyoxylate and dicarboxylate metabolism 3
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100784902 100811804 11406097 18106638 3768499 103852321 100248901 121219361 107936801 102620573 104646595 107775253 107831983 4336434 103646199 123427273 8082843 100824557
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