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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100811965   thioredoxin-like 3-1, chloroplastic 
 gma-r.7   100811965   thioredoxin-like 3-1, chloroplastic 
 gma-u.5   100783648   thioredoxin-like 3-1, chloroplastic-like 
 mtr-u.5   11437940   thioredoxin-like 3-1, chloroplastic 
 ppo-u.5   7488034   thioredoxin-like 3-1, chloroplastic 
 ath-u.5   WCRKC1   WCRKC thioredoxin 1 
 bra-r.6   103847007   thioredoxin-like 3-1, chloroplastic 
 vvi-u.5   100255487   thioredoxin-like 3-1, chloroplastic 
 ghi-r.1   107948478   thioredoxin-like 3-1, chloroplastic 
 ghi-r.1   107952832   thioredoxin-like 3-1, chloroplastic 
 bna-r.1   106375478   thioredoxin-like 3-1, chloroplastic 
 bna-r.1   106418995   thioredoxin-like 3-1, chloroplastic 
 cit-r.1   102621353   thioredoxin-like 3-1, chloroplastic 
 sly-u.5   101255936   thioredoxin-like 3-1, chloroplastic 
 sot-r.1   102599560   thioredoxin-like 3-1, chloroplastic 
 nta-r.1   107802806   thioredoxin-like 3-1, chloroplastic 
 nta-r.1   107777304   thioredoxin-like 3-1, chloroplastic 
 osa-u.5   4330886   thioredoxin-like 3-1, chloroplastic 
 zma-u.5   107522032   uncharacterized LOC107522032 
 zma-u.5   100284788   thioredoxin-like 5 
 tae-r.2   123145629   thioredoxin-like 3-1, chloroplastic 
 tae-r.2   123134607   thioredoxin-like 3-1, chloroplastic 
 tae-r.2   123128498   thioredoxin-like 3-1, chloroplastic 
 hvu-r.1   123404288   thioredoxin-like 3-1, chloroplastic 
 sbi-r.1   110434338   thioredoxin-like 3-1, chloroplastic 
 bdi-r.1   100823775   thioredoxin-like 3-1, chloroplastic 

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Top 50 coexpressed genes to 100811965 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100811965 (gma-u.5 coexpression data)

CoexMap"100811965"


gmaLOC100811965 | Entrez gene ID : 100811965      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 2 2 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009570 [list] [network] chloroplast stroma  (198 genes)  IEA  
GO MF
Protein XP_003554219.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  extr 1  (predict for XP_003554219.1)
Subcellular
localization
TargetP
other 4  (predict for XP_003554219.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100811965
gma-r.7
for
100811965
gma-u.5
for
100783648
mtr-u.5
for
11437940
ppo-u.5
for
7488034
ath-u.5
for
WCRKC1
bra-r.6
for
103847007
vvi-u.5
for
100255487
ghi-r.1
for
107948478
ghi-r.1
for
107952832
bna-r.1
for
106375478
bna-r.1
for
106418995
cit-r.1
for
102621353
sly-u.5
for
101255936
sot-r.1
for
102599560
nta-r.1
for
107802806
nta-r.1
for
107777304
osa-u.5
for
4330886
zma-u.5
for
107522032
zma-u.5
for
100284788
tae-r.2
for
123145629
tae-r.2
for
123134607
tae-r.2
for
123128498
hvu-r.1
for
123404288
sbi-r.1
for
110434338
bdi-r.1
for
100823775


Ortholog ID: 9078
Species gma gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100811965 LOC100783648 LOC11437940 LOC7488034 WCRKC1 LOC103847007 LOC100255487 LOC107948478 LOC107952832 LOC106375478 LOC106418995 LOC102621353 LOC101255936 LOC102599560 LOC107802806 LOC107777304 LOC4330886 LOC107522032 LOC100284788 LOC123145629 LOC123134607 LOC123128498 LOC123404288 LOC110434338 LOC100823775
Function* thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic-like thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic WCRKC thioredoxin 1 thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic uncharacterized LOC107522032 thioredoxin-like 5 thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic thioredoxin-like 3-1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00790 Folate biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta00030 Pentose phosphate pathway 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00030 Pentose phosphate pathway 2
nta00480 Glutathione metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00730 Thiamine metabolism 3
sbi01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100811965 100783648 11437940 7488034 830558 103847007 100255487 107948478 107952832 106375478 106418995 102621353 101255936 102599560 107802806 107777304 4330886 107522032 100284788 123145629 123134607 123128498 123404288 110434338 100823775
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