ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100812446	binding partner of ACD11 1
gma-r.7	100812446	binding partner of ACD11 1
gma-m.5	100812446	binding partner of ACD11 1
gma-u.5	100779011	binding partner of ACD11 1
mtr-u.5	11429169	binding partner of ACD11 1
ppo-u.5	7491050	binding partner of ACD11 1
ppo-u.5	7474654	binding partner of ACD11 1
ath-u.5	AT5G32450	RNA binding (RRM/RBD/RNP motifs) family protein
vvi-u.5	100246079	binding partner of ACD11 1
sly-u.5	101253037	binding partner of ACD11 1
osa-u.5	4334112	binding partner of ACD11 1
zma-u.5	103631469	binding partner of ACD11 1
zma-u.5	103630180	binding partner of ACD11 1
zma-u.5	100281821	RNA-binding region RNP-1

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003723 [list] [network] RNA binding

(2019 genes)

IEA

Protein

XP_003548711.1 [sequence] [blastp]
XP_006598967.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 8, nucl 1	(predict for XP_003548711.1)
cyto 9, nucl 1, cysk_nucl 1	(predict for XP_006598967.1)

Subcellular
localization
TargetP

other 7, mito 3	(predict for XP_003548711.1)
other 6	(predict for XP_006598967.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100812446	gma-r.7 for 100812446	gma-m.5 for 100812446	gma-u.5 for 100779011	mtr-u.5 for 11429169	ppo-u.5 for 7491050	ppo-u.5 for 7474654	ath-u.5 for AT5G32450	vvi-u.5 for 100246079	sly-u.5 for 101253037	osa-u.5 for 4334112	zma-u.5 for 103631469	zma-u.5 for 103630180	zma-u.5 for 100281821

Ortholog ID: 9124

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

binding partner of ACD11 1

RNA binding (RRM/RBD/RNP motifs) family protein

binding partner of ACD11 1

binding partner of ACD11 1-like

binding partner of ACD11 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04145	Phagosome	3
gma04148	Efferocytosis	3
gma04517	IgSF CAM signaling	3
gma04518	Integrin signaling	3
gma04620	Toll-like receptor signaling pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00062	Fatty acid elongation	2
mtr01040	Biosynthesis of unsaturated fatty acids	2
mtr01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	4
ghi00190	Oxidative phosphorylation	3
ghi04626	Plant-pathogen interaction	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	4
ghi00190	Oxidative phosphorylation	3
ghi04626	Plant-pathogen interaction	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04145	Phagosome	2
cit04148	Efferocytosis	2
cit04517	IgSF CAM signaling	2
cit04518	Integrin signaling	2
cit04620	Toll-like receptor signaling pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00100	Steroid biosynthesis	3
tae00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	3
tae00565	Ether lipid metabolism	3
tae04144	Endocytosis	3
tae00100	Steroid biosynthesis	3
tae00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	3
sbi01250	Biosynthesis of nucleotide sugars	3
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04130	SNARE interactions in vesicular transport	3
bdi00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

100779011

100812446

11429169

7474654

7491050

833204

103828434

100246079

107891617

107913460

106352100

106357735

102628737

101253037

102595744

107771444

107758939

4334112

103630180

103631469

123105024

123113316

123452232

8086249

100829340

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100812446 (gma-u.5 coexpression data)

Top 50 enrichment test to 100812446 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	2	1	1	1	1	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100812446 (gma-u.5 coexpression data)

Top 50 enrichment test to 100812446 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**