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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100814417   coatomer subunit beta-1 
 gma-r.7   100814417   coatomer subunit beta-1 
 gma-m.5   100814417   coatomer subunit beta-1 
 gma-u.5   100802469   coatomer subunit beta-1 
 mtr-u.5   25491248   coatomer subunit beta-1 
 ppo-u.5   7476239   coatomer subunit beta-1 
 ppo-u.5   18100737   coatomer subunit beta-2 
 ath-u.5   AT4G31480   Coatomer, beta subunit 
 ath-u.5   AT4G31490   Coatomer, beta subunit 
 bra-r.6   103862059   coatomer subunit beta-1 
 bra-r.6   103851803   coatomer subunit beta-1 
 bra-r.6   103834608   coatomer subunit beta-1 
 vvi-u.5   100242255   coatomer subunit beta-1-like 
 vvi-u.5   100255342   coatomer subunit beta-1 
 ghi-r.1   107962331   coatomer subunit beta-1 
 ghi-r.1   107937929   coatomer subunit beta-1 
 ghi-r.1   107906781   coatomer subunit beta-1 
 bna-r.1   106375416   coatomer subunit beta-1 
 bna-r.1   106374275   coatomer subunit beta-1 
 bna-r.1   106390047   coatomer subunit beta-1-like 
 cit-r.1   102624517   coatomer subunit beta-1 
 sly-u.5   101265667   coatomer subunit beta-1-like 
 sly-u.5   101248531   coatomer subunit beta-1 
 sot-r.1   102580399   coatomer subunit beta-1 
 sot-r.1   102585088   coatomer subunit beta-1-like 
 nta-r.1   107759478   coatomer subunit beta-1 
 nta-r.1   107817724   coatomer subunit beta-1 
 nta-r.1   107792487   coatomer subunit beta-1 
 osa-u.5   4326915   coatomer subunit beta-2 
 osa-u.5   4349913   coatomer subunit beta-1-like 
 zma-u.5   100384840   Retrovirus-related Pol polyprotein LINE-1 
 zma-u.5   100384159   Coatomer subunit beta-1 
 zma-u.5   100383446   Coatomer subunit beta 
 tae-r.2   123070478   coatomer subunit beta-1 
 tae-r.2   123069735   coatomer subunit beta-2 
 tae-r.2   123061162   coatomer subunit beta-2 
 hvu-r.1   123443550   coatomer subunit beta-2-like 
 hvu-r.1   123443546   coatomer subunit beta-2 
 sbi-r.1   8054681   coatomer subunit beta-2 
 sbi-r.1   8155702   coatomer subunit beta-2 
 bdi-r.1   100839296   coatomer subunit beta-2 
 bdi-r.1   100834189   coatomer subunit beta-2 
 cre-r.1   CHLRE_04g217921v5   uncharacterized protein 

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Top 50 coexpressed genes to 100814417 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100814417 (gma-u.5 coexpression data)

CoexMap"100814417"


gmaLOC100814417 | Entrez gene ID : 100814417      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 2 3 2 3 3 1 2 2 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006891 [list] [network] intra-Golgi vesicle-mediated transport  (52 genes)  IEA  
GO:0006888 [list] [network] endoplasmic reticulum to Golgi vesicle-mediated transport  (170 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (520 genes)  IEA  
GO CC
GO:0030126 [list] [network] COPI vesicle coat  (32 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0005198 [list] [network] structural molecule activity  (824 genes)  IEA  
Protein XP_003531763.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  plas 3,  nucl_plas 3,  cyto 1,  vacu 1,  cysk_nucl 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_003531763.1)
Subcellular
localization
TargetP
other 9,  scret 3  (predict for XP_003531763.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100814417
gma-r.7
for
100814417
gma-m.5
for
100814417
gma-u.5
for
100802469
mtr-u.5
for
25491248
ppo-u.5
for
7476239
ppo-u.5
for
18100737
ath-u.5
for
AT4G31480
ath-u.5
for
AT4G31490
bra-r.6
for
103862059
bra-r.6
for
103851803
bra-r.6
for
103834608
vvi-u.5
for
100242255
vvi-u.5
for
100255342
ghi-r.1
for
107962331
ghi-r.1
for
107937929
ghi-r.1
for
107906781
bna-r.1
for
106375416
bna-r.1
for
106374275
bna-r.1
for
106390047
cit-r.1
for
102624517
sly-u.5
for
101265667
sly-u.5
for
101248531
sot-r.1
for
102580399
sot-r.1
for
102585088
nta-r.1
for
107759478
nta-r.1
for
107817724
nta-r.1
for
107792487
osa-u.5
for
4326915
osa-u.5
for
4349913
zma-u.5
for
100384840
zma-u.5
for
100384159
zma-u.5
for
100383446
tae-r.2
for
123070478
tae-r.2
for
123069735
tae-r.2
for
123061162
hvu-r.1
for
123443550
hvu-r.1
for
123443546
sbi-r.1
for
8054681
sbi-r.1
for
8155702
bdi-r.1
for
100839296
bdi-r.1
for
100834189
cre-r.1
for
CHLRE_04g217921v5


Ortholog ID: 3128
Species gma gma mtr ppo ppo ath ath bra bra bra vvi vvi ghi ghi ghi bna bna bna cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100814417 LOC100802469 LOC25491248 LOC7476239 LOC18100737 AT4G31480 AT4G31490 LOC103862059 LOC103851803 LOC103834608 LOC100242255 LOC100255342 LOC107962331 LOC107937929 LOC107901630 LOC106390047 LOC106410259 LOC106424187 LOC102624517 LOC101265667 LOC101248531 LOC102580399 LOC102585088 LOC107759478 LOC107792487 LOC107763805 LOC4326915 LOC4349913 LOC100384840 LOC100384159 LOC100383446 LOC123070478 LOC123069735 LOC123069738 LOC123443550 LOC123443546 LOC8054681 LOC8155702 LOC100839296 LOC100834189 CHLRE_04g217921v5
Function* coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-2 Coatomer, beta subunit Coatomer, beta subunit coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1-like coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1-like coatomer subunit beta-1 coatomer subunit beta-1-like coatomer subunit beta-1 coatomer subunit beta-1-like coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1-like coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-1 coatomer subunit beta-2 coatomer subunit beta-1-like Retrovirus-related Pol polyprotein LINE-1 Coatomer subunit beta-1 Coatomer subunit beta coatomer subunit beta-1 coatomer subunit beta-2 coatomer subunit beta-2 coatomer subunit beta-2-like coatomer subunit beta-2 coatomer subunit beta-2 coatomer subunit beta-2 coatomer subunit beta-2 coatomer subunit beta-2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma04142 Lysosome 2
gma04144 Endocytosis 2
gma05100 Bacterial invasion of epithelial cells 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04141 Protein processing in endoplasmic reticulum 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 3
ppo05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 3
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 3
ath04144 Endocytosis 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath04141 Protein processing in endoplasmic reticulum 2
ath04142 Lysosome 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 3
ghi04144 Endocytosis 2
ghi05100 Bacterial invasion of epithelial cells 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 4
ghi04144 Endocytosis 3
ghi05100 Bacterial invasion of epithelial cells 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly04144 Endocytosis 3
sly00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 4
sly05100 Bacterial invasion of epithelial cells 4
sly04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00510 N-Glycan biosynthesis 3
sot04142 Lysosome 3
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot04814 Motor proteins 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
sot05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta00051 Fructose and mannose metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 3
nta00513 Various types of N-glycan biosynthesis 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04148 Efferocytosis 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta00051 Fructose and mannose metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00510 N-Glycan biosynthesis 6
tae04144 Endocytosis 4
tae00513 Various types of N-glycan biosynthesis 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04141 Protein processing in endoplasmic reticulum 2
tae04142 Lysosome 2
tae05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00520 Amino sugar and nucleotide sugar metabolism 4
hvu01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04142 Lysosome 2
hvu04144 Endocytosis 2
hvu05100 Bacterial invasion of epithelial cells 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03050 Proteasome 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04142 Lysosome 2
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04142 Lysosome 2
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100814417 100802469 25491248 7476239 18100737 829275 829276 103862059 103851803 103834608 100242255 100255342 107962331 107937929 107901630 106390047 106410259 106424187 102624517 101265667 101248531 102580399 102585088 107759478 107792487 107763805 4326915 4349913 100384840 100384159 100383446 123070478 123069735 123069738 123443550 123443546 8054681 8155702 100839296 100834189 5726816
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